RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	SCOC	Q9UIL1	159 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	TLK1	Q9UKI8	766 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	AAR2	Q9Y312	384 aa	Known RBP	12.94	□□□□□ -0.34
PKM-222	ENST00000568883	SBF1	O95248	1867 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ZCWPW2	A0A1B0GU75	182 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ARHGAP42	A6NI28	874 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	YJEFN3	A6XGL0	299 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PTGES	O14684	152 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ZBTB24	O43167	697 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	TRIM13	O60858	407 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	RPL9	P32969	192 aa	Known RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	HTR7	P34969	479 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ASPH	Q12797	758 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ANO4	Q32M45	955 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	FSTL4	Q6MZW2	842 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ARRDC4	Q8NCT1	418 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	OR6Y1	Q8NGX8	325 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	URGCP	Q8TCY9	931 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	STON2	Q8WXE9	905 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	FCRL3	Q96P31	734 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PANX3	Q96QZ0	392 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CDH19	Q9H159	772 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CRTAC1	Q9NQ79	661 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	TMPRSS4	Q9NRS4	437 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	SLCO1B7	G3V0H7	640 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	NRP1	O14786	923 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CCNT2	O60583	730 aa	Known RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PRKCG	P05129	697 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	FYN	P06241	537 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	TH	P07101	528 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PDHA1	P08559	390 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	C6orf222	P0C671	652 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PAX3	P23760	479 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CPOX	P36551	454 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CXCR3	P49682	368 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	DSG1	Q02413	1049 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	MAP2K5	Q13163	448 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PPM1J	Q5JR12	505 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	DCLRE1A	Q6PJP8	1040 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CES3	Q6UWW8	571 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	HFE2	Q6ZVN8	426 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CLEC14A	Q86T13	490 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	RSPH3	Q86UC2	560 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	SCML4	Q8N228	414 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ACTRT2	Q8TDY3	377 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	NRG4	Q8WWG1	115 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	FAM136A	Q96C01	138 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	TEKT5	Q96M29	485 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	NR1H4	Q96RI1	486 aa	Predicted RBP	12.93	□□□□□ -0.34
PKM-222	ENST00000568883	SMO	Q99835	787 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ZNF408	Q9H9D4	720 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	NMRAL1	Q9HBL8	299 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	CHST12	Q9NRB3	414 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	PNPO	Q9NVS9	261 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	OR12D3	Q9UGF7	316 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ARHGAP26	Q9UNA1	814 aa		12.93	□□□□□ -0.34
PKM-222	ENST00000568883	ZNF236	Q9UL36	1845 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	MAGEA13P	A6NCF6	341 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	FAM72C	H0Y354	149 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	SLC22A2	O15244	555 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	SNUPN	O95149	360 aa	Known RBP	12.92	□□□□□ -0.34
PKM-222	ENST00000568883	RPLP2	P05387	115 aa	Known RBP	12.92	□□□□□ -0.34
PKM-222	ENST00000568883	COL6A2	P12110	1019 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	YBX3	P16989	372 aa	Known RBP eCLIP	12.92	□□□□□ -0.34	5e-18	■□□□□ 9.3
PKM-222	ENST00000568883	NFKB1	P19838	968 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	NCF2	P19878	526 aa	Predicted RBP	12.92	□□□□□ -0.34
PKM-222	ENST00000568883	HSP90AA5P	Q58FG0	334 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	MAP3K21	Q5TCX8	1036 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	FAM72A	Q5TYM5	149 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	ARMC3	Q5W041	872 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	FAM72D	Q6L9T8	149 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	TMEM154	Q6P9G4	183 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	BEND5	Q7L4P6	421 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	CMC1	Q7Z7K0	106 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	FAM72B	Q86X60	149 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	METTL23	Q86XA0	190 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	PCED1B	Q96HM7	432 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	TSGA13	Q96PP4	275 aa		12.92	□□□□□ -0.34
PKM-222	ENST00000568883	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.92	□□□□□ -0.34
PKM-222	ENST00000568883		A0A088AWK7	358 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	ATP9B	O43861	1147 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	KPNA6	O60684	536 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	ANXA9	O76027	345 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	C2	P06681	752 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	USP17L7	P0C7H9	530 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	ODC1	P11926	461 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	PAX7	P23759	505 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	KPNA2	P52292	529 aa	Known RBP	12.91	□□□□□ -0.34
PKM-222	ENST00000568883	OLFML2B	Q68BL8	750 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	EPGN	Q6UW88	154 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	SETD3	Q86TU7	594 aa	Predicted RBP	12.91	□□□□□ -0.34
PKM-222	ENST00000568883	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.91	□□□□□ -0.34
PKM-222	ENST00000568883	LZTR1	Q8N653	840 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	FBXO27	Q8NI29	283 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	ADAM32	Q8TC27	787 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	PTCD2	Q8WV60	388 aa	Known RBP	12.91	□□□□□ -0.34
PKM-222	ENST00000568883	RNF34	Q969K3	372 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	VPS39	Q96JC1	886 aa		12.91	□□□□□ -0.34
PKM-222	ENST00000568883	KCNK16	Q96T55	309 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms