RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
FANCA-229ENST00000567988 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 CA9Q16790 459 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 FNDC3BQ53EP0 1204 aaKnown RBP12.61□□□□□ -0.39
FANCA-229ENST00000567988 DCUN1D2Q6PH85 259 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 LRRC31Q6UY01 552 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 PRR23BQ6ZRT6 265 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 CEP68Q76N32 757 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 TFAP2DQ7Z6R9 452 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 SLFN11Q7Z7L1 901 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 TMPRSS6Q8IU80 811 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 ERLEC1Q96DZ1 483 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 CHP1Q99653 195 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 KLC2Q9H0B6 622 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 PRDM16Q9HAZ2 1276 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
FANCA-229ENST00000567988 VPS51Q9UID3 782 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
FANCA-229ENST00000567988 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
FANCA-229ENST00000567988 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 SYNCRIPO60506 623 aaKnown RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 SNAP91O60641 907 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 MOCS3O95396 460 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 MT-CO1P00395 513 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 RHOCP08134 193 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 SRCP12931 536 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 VAV1P15498 845 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 TCF4P15884 667 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 GLDCP23378 1020 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 PSMA2P25787 234 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 IL1R2P27930 398 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 MIPP30301 263 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 PTGER3P43115 390 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 GALCP54803 685 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 GFPT1Q06210 699 aaPredicted RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 CSRP2Q16527 193 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 C6orf118Q5T5N4 469 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 PSTKQ8IV42 348 aaKnown RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 SLC41A1Q8IVJ1 513 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 SH2D3CQ8N5H7 860 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
FANCA-229ENST00000567988 PACSIN1Q9BY11 444 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
FANCA-229ENST00000567988 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
FANCA-229ENST00000567988 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 ZNF806P0C7X5 589 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 HTR7P34969 479 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 NUMBP49757 651 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 ZNF75DP51815 510 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 ARF5P84085 180 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 SLC25A11Q02978 314 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 GNA12Q03113 381 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 ACAP1Q15027 740 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 CCDC122Q5T0U0 273 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 OR7D4Q8NG98 312 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 FAM71BQ8TC56 605 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 ZNF419Q96HQ0 510 aaPredicted RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 SPACA7Q96KW9 195 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
FANCA-229ENST00000567988 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 NCDNQ9UBB6 729 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 RAB23Q9ULC3 237 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
FANCA-229ENST00000567988 K7ERQ8 282 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
FANCA-229ENST00000567988 CD6P30203 668 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 OR1E1P30953 314 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 ACVRL1P37023 503 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 MPLP40238 635 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 CLCN6P51797 869 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 ST8SIA6P61647 398 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
FANCA-229ENST00000567988 TCEAL1Q15170 157 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 ELF2Q15723 593 aa12.58□□□□□ -0.4
FANCA-229ENST00000567988 DPYSL2Q16555 572 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms