RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TBC1D3KA0A087X1G2 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3FA6NER0 549 aaPredicted RBP15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3LB9A6J9 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TLR4O00206 839 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 FOXN3O00409 490 aaPredicted RBP15.42■□□□□ 0.06
RNF40-209ENST00000566703 MCF2LO15068 1137 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 MAGEC1O60732 1142 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 DAB1O75553 588 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 F9P00740 461 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3HP0C7X1 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 MTIF2P46199 727 aaKnown RBP15.42■□□□□ 0.06
RNF40-209ENST00000566703 ARRB1P49407 418 aaPredicted RBP15.42■□□□□ 0.06
RNF40-209ENST00000566703 CDH4P55283 916 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 BRMS1LQ5PSV4 323 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3GQ6DHY5 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3CQ6IPX1 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 FAM183BPQ6ZVS7 135 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TMPRSS12Q86WS5 348 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3Q8IZP1 549 aaPredicted RBP15.42■□□□□ 0.06
RNF40-209ENST00000566703 SAP25Q8TEE9 199 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 SIX2Q9NPC8 291 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 DNAJC12Q9UKB3 198 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 PPM1HQ9ULR3 514 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 GPSM3Q9Y4H4 160 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 HS3ST4Q9Y661 456 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 CEP295Q9C0D2 2601 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 CABIN1Q9Y6J0 2220 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 SYNJ2BP-COX16A0A087WUM0 186 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 TRABD2BA6NFA1 517 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 GOLGA8CPA6NN73 597 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 C1QTNF3-AMACRE9PGA6 284 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 M0QYT0 321 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 PLRG1O43660 514 aaKnown RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 PAGE1O75459 146 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 GRAP2O75791 330 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 LDOC1O95751 146 aaPredicted RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 ERBB2P04626 1255 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 CLCN1P35523 988 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 SCNN1AP37088 669 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 NXPH1P58417 271 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 CCDC15Q0P6D6 951 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 NME3Q13232 169 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 CAMK2BQ13554 666 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 SHBQ15464 509 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 DLG2Q15700 870 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 NAPEPLDQ6IQ20 393 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 TRIM69Q86WT6 500 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 CIR1Q86X95 450 aaPredicted RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 PASD1Q8IV76 773 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 FAM114A1Q8IWE2 563 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 FAM71AQ8IYT1 594 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 PGAP3Q96FM1 320 aaPredicted RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 C1orf74Q96LT6 269 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 NPY6RQ99463 290 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 WDCPQ9H6R7 721 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 COX16Q9P0S2 106 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 VANGL2Q9ULK5 521 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
RNF40-209ENST00000566703 PAXBP1Q9Y5B6 917 aa15.41■□□□□ 0.06
RNF40-209ENST00000566703 KNL1Q8NG31 2342 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 ENC1O14682 589 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 WNT9AO14904 365 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 RNGTTO60942 597 aaKnown RBP15.4■□□□□ 0.06
RNF40-209ENST00000566703 VAV1P15498 845 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 CDH5P33151 784 aaPredicted RBP15.4■□□□□ 0.06
RNF40-209ENST00000566703 CXCR3P49682 368 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 KRT83P78385 493 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 IL9RQ01113 521 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 APBA1Q02410 837 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 CAMK4Q16566 473 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 TPD52L1Q16890 204 aaPredicted RBP15.4■□□□□ 0.06
RNF40-209ENST00000566703 PTPN20Q4JDL3 420 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 NEK5Q6P3R8 708 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 GATAD2AQ86YP4 633 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 OR52K2Q8NGK3 314 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 NT5C3BQ969T7 300 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 ARHGEF38Q9NXL2 777 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.4■□□□□ 0.06
RNF40-209ENST00000566703 VPS28Q9UK41 221 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 SARDHQ9UL12 918 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 HS3ST2Q9Y278 367 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 PLXNB3Q9ULL4 1909 aa15.4■□□□□ 0.06
RNF40-209ENST00000566703 DRGXA6NNA5 263 aa15.39■□□□□ 0.05
RNF40-209ENST00000566703 PRAMEF26H0Y7S4 382 aa15.39■□□□□ 0.05
RNF40-209ENST00000566703 ZNF18P17022 549 aa15.39■□□□□ 0.05
RNF40-209ENST00000566703 EPHA8P29322 1005 aaPredicted RBP15.39■□□□□ 0.05
RNF40-209ENST00000566703 GABRB2P47870 512 aa15.39■□□□□ 0.05
RNF40-209ENST00000566703 CENPCQ03188 943 aa15.39■□□□□ 0.05
RNF40-209ENST00000566703 ILKQ13418 452 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms