RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 LATS1O95835 1130 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 APRTP07741 180 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 CCNCP24863 283 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ACVRL1P37023 503 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 KCNC3Q14003 757 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ARHGAP15Q53QZ3 475 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 BBS7Q8IWZ6 715 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 CMTM8Q8IZV2 173 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 OR52K2Q8NGK3 314 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 SMG7Q92540 1137 aaKnown RBP18.1■□□□□ 0.49
HERC2-208ENST00000566635 AGAP3Q96P47 875 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 RBM15Q96T37 977 aaKnown RBP eCLIP18.1■□□□□ 0.49
HERC2-208ENST00000566635 IGFLR1Q9H665 355 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 TASP1Q9H6P5 420 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 IPO11Q9UI26 975 aaKnown RBP18.1■□□□□ 0.49
HERC2-208ENST00000566635 ARHGAP26Q9UNA1 814 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 SH3BP1Q9Y3L3 701 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 PDE4DIPQ5VU43 2346 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 GOLGA6BA6NDN3 693 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ZBTB24O43167 697 aaPredicted RBP18.1■□□□□ 0.49
HERC2-208ENST00000566635 JCHAINP01591 159 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 POU2F2P09086 479 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 PFKLP17858 780 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 AVPR1AP37288 418 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 CDH4P55283 916 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ZNF33AQ06730 810 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 FASTKD3Q14CZ7 662 aaKnown RBP18.1■□□□□ 0.49
HERC2-208ENST00000566635 MSS51Q4VC12 460 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 FNBP1LQ5T0N5 605 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 CFAP58Q5T655 872 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ELMSAN1Q6PJG2 1045 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 PID1Q7Z2X4 250 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 ZNF354CQ86Y25 554 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 LEMD2Q8NC56 503 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 MRPL38Q96DV4 380 aaKnown RBP18.1■□□□□ 0.49
HERC2-208ENST00000566635 PIDD1Q9HB75 910 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
HERC2-208ENST00000566635 CHD5Q8TDI0 1954 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 C5orf42Q9H799 3197 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 J3KR12 359 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 PRAMEF12O95522 483 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 DDX6P26196 483 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■□□□ 12.6
HERC2-208ENST00000566635 CD68P34810 354 aaPredicted RBP18.09■□□□□ 0.49
HERC2-208ENST00000566635 MAGEA6P43360 314 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 SEMA5AQ13591 1074 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 HIF1AQ16665 826 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 HP1BP3Q5SSJ5 553 aaPredicted RBP18.09■□□□□ 0.49
HERC2-208ENST00000566635 OR2W6PQ8NHA6 318 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 SH3RF2Q8TEC5 729 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 ZSWIM3Q96MP5 696 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 DDX50Q9BQ39 737 aaKnown RBP18.09■□□□□ 0.49
HERC2-208ENST00000566635 GORASP1Q9BQQ3 440 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 PLAAQ9Y263 795 aa18.09■□□□□ 0.49
HERC2-208ENST00000566635 ARHGAP42A6NI28 874 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 AGPSO00116 658 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 MTSS1O43312 755 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 CCNB1P14635 433 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 NFKB1P19838 968 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 IFI35P80217 286 aaPredicted RBP18.08■□□□□ 0.49
HERC2-208ENST00000566635 POLD3Q15054 466 aaPredicted RBP18.08■□□□□ 0.49
HERC2-208ENST00000566635 TEX44Q53QW1 395 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 HTR3DQ70Z44 454 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 FAM217AQ8IXS0 508 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 IQCKQ8N0W5 287 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 CNTD1Q8N815 330 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 ITFG1Q8TB96 612 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 USP13Q92995 863 aaPredicted RBP18.08■□□□□ 0.49
HERC2-208ENST00000566635 BHMTQ93088 406 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 C9orf72Q96LT7 481 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 APOL5Q9BWW9 433 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 FOXP3Q9BZS1 431 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 PABPC3Q9H361 631 aaKnown RBP18.08■□□□□ 0.49
HERC2-208ENST00000566635 SFXN1Q9H9B4 322 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 IGSF9Q9P2J2 1179 aa18.08■□□□□ 0.49
HERC2-208ENST00000566635 A0A0D9SEW6 157 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 A0A1B0GVM2 712 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 TCAF2A6NFQ2 919 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 GFRA2O00451 464 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 MATN3O15232 486 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 TBL1XO60907 577 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 CLDN11O75508 207 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 ZNF189O75820 626 aaPredicted RBP18.08■□□□□ 0.48
HERC2-208ENST00000566635 GLP2RO95838 553 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 PEX11BO96011 259 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 FDFT1P37268 417 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 PARP15Q460N3 678 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 TIGD7Q6NT04 549 aaPredicted RBP18.08■□□□□ 0.48
HERC2-208ENST00000566635 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 CHST9Q7L1S5 443 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 OR7D4Q8NG98 312 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 EXOC4Q96A65 974 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 TEKT5Q96M29 485 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 GBA3Q9H227 469 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 SP110Q9HB58 689 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 NINJ2Q9NZG7 142 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 RSPH14Q9UHP6 348 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
HERC2-208ENST00000566635 MRPS23Q9Y3D9 190 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms