RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 UQCRC1P31930 480 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CXCR5P32302 372 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 HTR7P34969 479 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 ARL1P40616 181 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 MTHFRP42898 656 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 ETV4P43268 484 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CCR10P46092 362 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TDO2P48775 406 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 NPY4RP50391 375 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CDK7P50613 346 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 STAT2P52630 851 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 NPEPPSP55786 919 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 YBX1P67809 324 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 RBM6P78332 1123 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 PRAMEP78395 509 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 PIGFQ07326 219 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TOP3AQ13472 1001 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 FHL3Q13643 280 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 RUNX2Q13950 521 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TRIM29Q14134 588 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KCNJ12Q14500 433 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 UBXN2BQ14CS0 331 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 AAK1Q2M2I8 961 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SMU1Q2TAY7 513 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 C5orf22Q49AR2 442 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 NOMO2Q5JPE7 1267 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 MPP7Q5T2T1 576 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CERCAMQ5T4B2 595 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KIAA0930Q6ICG6 404 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC144NLQ6NUI1 221 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 C11orf88Q6PI97 169 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 OTOAQ7RTW8 1153 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KBTBD6Q86V97 674 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 RHPN2Q8IUC4 686 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 IGDCC3Q8IVU1 814 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TUSC5Q8IXB3 177 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 OR4N4Q8N0Y3 316 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CFAP52Q8N1V2 620 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SYT2Q8N9I0 419 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 IL17RCQ8NAC3 791 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CTCFLQ8NI51 663 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SUN3Q8TAQ9 357 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KCNE4Q8WWG9 221 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CNOT9Q92600 299 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TFAP2CQ92754 450 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 ATP6V0A1Q93050 837 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 C1orf74Q96LT6 269 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 WDR24Q96S15 920 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 WRNIP1Q96S55 665 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 GAD1Q99259 594 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 PAFAH2Q99487 392 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 GORASP1Q9BQQ3 440 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 NAA11Q9BSU3 229 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 FUT8Q9BYC5 575 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 EPHX3Q9H6B9 360 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SCPEP1Q9HB40 452 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SNTG1Q9NSN8 517 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 THAP1Q9NVV9 213 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SMPD4Q9NXE4 827 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 IL1RAPL1Q9NZN1 696 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 HCN3Q9P1Z3 774 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 MARCH4Q9P2E8 410 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KLHL14Q9P2G3 628 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 PEMTQ9UBM1 199 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 XPO7Q9UIA9 1087 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SERTAD3Q9UJW9 196 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 RIMKLBQ9ULI2 386 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SORCS3Q9UPU3 1222 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SESN1Q9Y6P5 492 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CAPN7Q9Y6W3 813 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 BICRAQ9NZM4 1560 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TEX22C9J3V5 150 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PRPF4O43172 522 aaKnown RBP eCLIP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CTIFO43310 598 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 ZBTB14O43829 449 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PRICKLE3O43900 615 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 KINO60870 393 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PPFIA2O75334 1257 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TACC1O75410 805 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TADA2AO75478 443 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC22A3O75751 556 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SEC31AO94979 1220 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PRSS23O95084 383 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CSPG5O95196 566 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 OR2C1O95371 312 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 VNN1O95497 513 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 C22orf31O95567 290 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SUPT20HL2P0C7V6 817 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SPATA31D3P0C874 917 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TMIGD3P0DMS9 266 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 GABRB1P18505 474 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 AVPR2P30518 371 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 MC5RP33032 325 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CDR1P51861 262 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 POLGP54098 1239 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 NCKAP1LP55160 1127 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 YBEYP58557 167 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TAS2R50P59544 299 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms