RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZBTB1Q9Y2K1 713 aa2.54□□□□□ -2
SMG1-212ENST00000566328 RAP2CQ9Y3L5 183 aa2.54□□□□□ -2
SMG1-212ENST00000566328 LINC01553A4QN01 128 aa2.53□□□□□ -2
SMG1-212ENST00000566328 SOX30O94993 753 aa2.53□□□□□ -2
SMG1-212ENST00000566328 LDLRP01130 860 aa2.53□□□□□ -2
SMG1-212ENST00000566328 RNF224P0DH78 156 aa2.53□□□□□ -2
SMG1-212ENST00000566328 KLRC2P26717 231 aa2.53□□□□□ -2
SMG1-212ENST00000566328 GLIPR1P48060 266 aa2.53□□□□□ -2
SMG1-212ENST00000566328 PEX5P50542 639 aa2.53□□□□□ -2
SMG1-212ENST00000566328 TRAF3Q13114 568 aa2.53□□□□□ -2
SMG1-212ENST00000566328 SNTA1Q13424 505 aa2.53□□□□□ -2
SMG1-212ENST00000566328 SEMA5AQ13591 1074 aa2.53□□□□□ -2
SMG1-212ENST00000566328 HNF4GQ14541 408 aa2.53□□□□□ -2
SMG1-212ENST00000566328 PLEKHO1Q53GL0 409 aaPredicted RBP2.53□□□□□ -2
SMG1-212ENST00000566328 STPG1Q5TH74 334 aa2.53□□□□□ -2
SMG1-212ENST00000566328 RAP1GAP2Q684P5 730 aa2.53□□□□□ -2
SMG1-212ENST00000566328 NXNQ6DKJ4 435 aa2.53□□□□□ -2
SMG1-212ENST00000566328 MDGA2Q7Z553 956 aa2.53□□□□□ -2
SMG1-212ENST00000566328 RASGRP3Q8IV61 690 aa2.53□□□□□ -2
SMG1-212ENST00000566328 NAGSQ8N159 534 aa2.53□□□□□ -2
SMG1-212ENST00000566328 LRRC57Q8N9N7 239 aa2.53□□□□□ -2
SMG1-212ENST00000566328 POC1AQ8NBT0 407 aa2.53□□□□□ -2
SMG1-212ENST00000566328 CMASQ8NFW8 434 aaPredicted RBP2.53□□□□□ -2
SMG1-212ENST00000566328 TMEM163Q8TC26 289 aa2.53□□□□□ -2
SMG1-212ENST00000566328 SLC22A17Q8WUG5 538 aa2.53□□□□□ -2
SMG1-212ENST00000566328 TAF15Q92804 592 aaKnown RBP eCLIP2.53□□□□□ -2
SMG1-212ENST00000566328 ADGRG7Q96K78 797 aa2.53□□□□□ -2
SMG1-212ENST00000566328 DUX3Q96PT4 197 aa2.53□□□□□ -2
SMG1-212ENST00000566328 GFM1Q96RP9 751 aaKnown RBP2.53□□□□□ -2
SMG1-212ENST00000566328 SLC25A33Q9BSK2 321 aa2.53□□□□□ -2
SMG1-212ENST00000566328 PRDM11Q9NQV5 511 aa2.53□□□□□ -2
SMG1-212ENST00000566328 CA14Q9ULX7 337 aa2.53□□□□□ -2
SMG1-212ENST00000566328 IGLV5-52A0A0A0MRZ9 124 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 PNMA6EA0A0J9YXQ4 647 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 RHPN2P1A8MT19 583 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 ITM2AO43736 263 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 ITGA5P08648 1049 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 AMD1P17707 334 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 FGFR2P21802 821 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 C21orf33P30042 268 aaPredicted RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 CRIP2P52943 208 aaPredicted RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 ILF3Q12906 894 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMG1-212ENST00000566328 MAPKAPK3Q16644 382 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 AAK1Q2M2I8 961 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 ARHGAP15Q53QZ3 475 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 ANKRD40Q6AI12 368 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 PLEKHA7Q6IQ23 1121 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 MON1BQ7L1V2 547 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 TCEAL8Q8IYN2 117 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 HORMAD2Q8N7B1 307 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 MAGEB6Q8N7X4 407 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 CTCFLQ8NI51 663 aaPredicted RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 IL17FQ96PD4 163 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 SORBS1Q9BX66 1292 aaKnown RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 HELLSQ9NRZ9 838 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 MYO1AQ9UBC5 1043 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 FBXO4Q9UKT5 387 aa2.52□□□□□ -2.01
SMG1-212ENST00000566328 AGO1Q9UL18 857 aaKnown RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 COL2A1P02458 1487 aaPredicted RBP2.52□□□□□ -2.01
SMG1-212ENST00000566328 IGLV5-37A0A075B6J1 123 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CYP3A7-CYP3A51PA0A087WV96 503 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 SAA2-SAA4A0A096LPE2 208 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 IGHV4-28A0A0C4DH34 117 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 MAGEA13PA6NCF6 341 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 J3KTA2 159 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CLGNO14967 610 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 DHHO43323 396 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 LDB2O43679 373 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 PAK4O96013 591 aaPredicted RBP2.51□□□□□ -2.01
SMG1-212ENST00000566328 CYP3A4P08684 503 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 ENO3P13929 434 aaPredicted RBP2.51□□□□□ -2.01
SMG1-212ENST00000566328 PECAM1P16284 738 aaPredicted RBP2.51□□□□□ -2.01
SMG1-212ENST00000566328 CYP3A7P24462 503 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 GRK5P34947 590 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 PPP3CCP48454 512 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CYP2J2P51589 502 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CDH12P55289 794 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 TMPRSS3P57727 454 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 TAS2R50P59544 299 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 ERVK11-1P61568 191 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 ARL13AQ5H913 290 aaPredicted RBP2.51□□□□□ -2.01
SMG1-212ENST00000566328 VWA5B1Q5TIE3 1220 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 TMEM71Q6P5X7 295 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 C9orf139Q6ZV77 190 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 ANKS1BQ7Z6G8 1248 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CCDC33Q8N5R6 958 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 ANKRD44Q8N8A2 993 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 WDSUB1Q8N9V3 476 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 MIGA1Q8NAN2 632 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 C1QTNF5Q9BXJ0 243 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMG1-212ENST00000566328 ZDHHC7Q9NXF8 308 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 NFU1Q9UMS0 254 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 CORO2BQ9UQ03 480 aa2.51□□□□□ -2.01
SMG1-212ENST00000566328 hCG_2014768A0A024R1R8 64 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.5□□□□□ -2.01
SMG1-212ENST00000566328 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 C17orf102A2RUQ5 167 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 GOLGA6CA6NDK9 693 aa2.5□□□□□ -2.01
SMG1-212ENST00000566328 GOLGA6BA6NDN3 693 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms