RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	CCL16	O15467	120 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	OPHN1	O60890	802 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	SPAG7	O75391	227 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	FDFT1	P37268	417 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	GRIK1	P39086	918 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	GRIA1	P42261	906 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	MSH2	P43246	934 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	SLC18A1	P54219	525 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	WDR4	P57081	412 aa	Known RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	MGAT5B	Q3V5L5	792 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	KBTBD12	Q3ZCT8	623 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	RARS2	Q5T160	578 aa	Known RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	SYCE2	Q6PIF2	218 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	C6orf89	Q6UWU4	347 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	C4orf33	Q8N1A6	199 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	GDAP1	Q8TB36	358 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	DENND1A	Q8TEH3	1009 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	LRRC39	Q96DD0	335 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	PABPC5	Q96DU9	382 aa	Known RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	TRIM62	Q9BVG3	475 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	CEP41	Q9BYV8	373 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	XAB2	Q9HCS7	855 aa	Known RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	HCFC1R1	Q9NWW0	138 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	RAD54B	Q9Y620	910 aa		10.4	□□□□□ -0.74
TCF4-231	ENST00000566279	DOCK6	Q96HP0	2047 aa		10.4	□□□□□ -0.75
TCF4-231	ENST00000566279		F5H423	210 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	STK10	O94804	968 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	VIM	P08670	466 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ATF6	P18850	670 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	STX2	P32856	288 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ZNF135	P52742	658 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SLC20A2	Q08357	652 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	DDR2	Q16832	855 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	MICALCL	Q6ZW33	695 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PDZD4	Q76G19	769 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SCD5	Q86SK9	330 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PRPF39	Q86UA1	669 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	TAX1BP1	Q86VP1	789 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	GPR65	Q8IYL9	337 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CACNA2D3	Q8IZS8	1091 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ZNF567	Q8N184	647 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	MPP5	Q8N3R9	675 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CCNY	Q8ND76	341 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SLC44A1	Q8WWI5	657 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SGSM3	Q96HU1	749 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SIGLEC10	Q96LC7	697 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SMC6	Q96SB8	1091 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CDCA3	Q99618	268 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	EPAS1	Q99814	870 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	UBE2Z	Q9H832	354 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	EIF2B3	Q9NR50	452 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	OR12D3	Q9UGF7	316 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	AFF4	Q9UHB7	1163 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SMG5	Q9UPR3	1016 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	INSL5	Q9Y5Q6	135 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CCDC195	A0A1B0GUA6	201 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	TCP11X1	B4DZS4	312 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	NRG2	O14511	850 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	IRAK2	O43187	625 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	TYROBP	O43914	113 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	LRIG2	O94898	1065 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ASMTL	O95671	621 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CP	P00450	1065 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SP100	P23497	879 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PRKCH	P24723	683 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PSMB4	P28070	264 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	CORO7	P57737	925 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	NTHL1	P78549	312 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PPID	Q08752	370 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	TWF1	Q12792	350 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	IFRD2	Q12894	506 aa	Predicted RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ANKRD54	Q6NXT1	300 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	UNC5A	Q6ZN44	842 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	PIGW	Q7Z7B1	504 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SCN4B	Q8IWT1	228 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	DCP1B	Q8IZD4	617 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	GIPC2	Q8TF65	315 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	EBNA1BP2	Q99848	306 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	OSBPL2	Q9H1P3	480 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SMOC2	Q9H3U7	446 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SSU72	Q9NP77	194 aa	Known RBP	10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	ARHGEF38	Q9NXL2	777 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	SEPT10	Q9P0V9	454 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	NEU3	Q9UQ49	428 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	YIPF1	Q9Y548	306 aa		10.39	□□□□□ -0.75
TCF4-231	ENST00000566279	GSTA2	P09210	222 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	PTPN3	P26045	913 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	FOXN2	P32314	431 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	ELF1	P32519	619 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	RPA3	P35244	121 aa	Predicted RBP	10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	CDK16	Q00536	496 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	GALNT2	Q10471	571 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	COL19A1	Q14993	1142 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	PARP6	Q2NL67	630 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	PPM1L	Q5SGD2	360 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	BTBD8	Q5XKL5	378 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	PDCD7	Q8N8D1	485 aa	Known RBP	10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms