RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 SLC11A2P49281 568 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CDH18Q13634 790 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 LY6DQ14210 128 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 KRT31Q15323 416 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 MPP7Q5T2T1 576 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CACTIN-AS1Q8N1I8 211 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 STK40Q8N2I9 435 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CARNMT1Q8N4J0 409 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 ZNF557Q8N988 423 aaPredicted RBP16.29■□□□□ 0.2
EDC3-210ENST00000566219 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 MYEOVQ96EZ4 313 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CLMPQ9H6B4 373 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
EDC3-210ENST00000566219 ERVW-1Q9UQF0 538 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 DOCK9Q9BZ29 2069 aa16.29■□□□□ 0.2
EDC3-210ENST00000566219 ITIH6Q6UXX5 1313 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 EDDM13A0A1B0GTR0 161 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 TRIM38O00635 465 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 IRAK2O43187 625 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 LATO43561 262 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 ACSL4O60488 711 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 ADH1BP00325 375 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 IGLV3-27P01718 113 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 GOT1P17174 413 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 MAT2AP31153 395 aaKnown RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 UCNP55089 124 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 RPS24P62847 133 aaKnown RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 GABREP78334 506 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 DAB2P98082 770 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 PITRM1Q5JRX3 1037 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 TTC39CQ8N584 583 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 MFSD2AQ8NA29 543 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 FIBINQ8TAL6 211 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 HIC2Q96JB3 615 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 ZNF578Q96N58 590 aaPredicted RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 INTS2Q9H0H0 1204 aaKnown RBP16.28■□□□□ 0.2
EDC3-210ENST00000566219 ABCC13Q9NSE7 274 aa16.28■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3DA0A087WVF3 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3IA0A087WXS9 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3EA0A087X179 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3KA0A087X1G2 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TARSL2A2RTX5 802 aaKnown RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 TYW5A2RUC4 315 aaKnown RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3FA6NER0 549 aaPredicted RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 BECN2A8MW95 431 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3LB9A6J9 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 IL1BP01584 269 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3HP0C7X1 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 LCP1P13796 627 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 C5AR1P21730 350 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 NUMBP49757 651 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 METAP1P53582 386 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 DAOAP59103 153 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 E2F1Q01094 437 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 CUL2Q13617 745 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 ARID5BQ14865 1188 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 PKDCCQ504Y2 493 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 FSCBQ5H9T9 825 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3GQ6DHY5 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3CQ6IPX1 549 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TBC1D3Q8IZP1 549 aaPredicted RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 ANKRD20A12PQ8NF67 263 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 KCNE4Q8WWG9 221 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 FAM129BQ96TA1 746 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.27■□□□□ 0.2
EDC3-210ENST00000566219 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 TPX2Q9ULW0 747 aaKnown RBP16.27■□□□□ 0.2
EDC3-210ENST00000566219 CA5BQ9Y2D0 317 aa16.27■□□□□ 0.2
EDC3-210ENST00000566219 PIK3R2O00459 728 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 FFAR2O15552 330 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 ARHGAP6O43182 974 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 SRPRAP08240 638 aaKnown RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 CD19P15391 556 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 TBXAS1P24557 533 aaPredicted RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 PON1P27169 355 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 DRD3P35462 400 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 TBX4P57082 545 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 LRMPQ12912 555 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 EXOC3L4Q17RC7 722 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 RNF219Q5W0B1 726 aaPredicted RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 TRIM65Q6PJ69 517 aa16.26■□□□□ 0.19
EDC3-210ENST00000566219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 PRPF39Q86UA1 669 aaKnown RBP16.26■□□□□ 0.19
EDC3-210ENST00000566219 LUZP1Q86V48 1076 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms