RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PCED1AQ9H1Q7 454 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 CD93Q9NPY3 652 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 TMPRSS4Q9NRS4 437 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 OR12D3Q9UGF7 316 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 SUSD2Q9UGT4 822 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 SNX10Q9Y5X0 201 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 DMXL1Q9Y485 3027 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 RTN2O75298 545 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 ELAVL3Q14576 367 aaKnown RBP20.39■□□□□ 0.85
CMTM3-211ENST00000565922 PPP1R15BQ5SWA1 713 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 SH3PXD2AQ5TCZ1 1133 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 E4F1Q66K89 784 aaPredicted RBP20.39■□□□□ 0.85
CMTM3-211ENST00000565922 ERMP1Q7Z2K6 904 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 TFAP2DQ7Z6R9 452 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 DCAF4L2Q8NA75 395 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 GPR174Q9BXC1 333 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 SMOC1Q9H4F8 434 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 TAS2R14Q9NYV8 317 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 MPP6Q9NZW5 540 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 SLCO3A1Q9UIG8 710 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 PILRBQ9UKJ0 227 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 CAPN11Q9UMQ6 739 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 NCKAP1Q9Y2A7 1128 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 LUC7L2Q9Y383 392 aaKnown RBP20.39■□□□□ 0.85
CMTM3-211ENST00000565922 OR51B4Q9Y5P0 310 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 SCINQ9Y6U3 715 aa20.39■□□□□ 0.85
CMTM3-211ENST00000565922 ILVBLA1L0T0 632 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 MEI4A8MW99 385 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 TTC34A8MYJ7 566 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 SLC30A4O14863 429 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 CCP110O43303 1012 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 MYBL1P10243 752 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 GNSP15586 552 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 ITPKAP23677 461 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 ETFBP38117 255 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 STK19P49842 368 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-211ENST00000565922 RPL7AP62424 266 aaKnown RBP20.38■□□□□ 0.85
CMTM3-211ENST00000565922 SCAPQ12770 1279 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 DUOXA1Q1HG43 343 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 TRIM61Q5EBN2 209 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 EFHC2Q5JST6 749 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 PLEKHA7Q6IQ23 1121 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 USP30Q70CQ3 517 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 SLFN11Q7Z7L1 901 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 DSG4Q86SJ6 1040 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 SLC41A1Q8IVJ1 513 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 RGL4Q8IZJ4 473 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 DEFB119Q8N690 84 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 OR52K2Q8NGK3 314 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 EDEM2Q9BV94 578 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 BTBD1Q9H0C5 482 aa20.38■□□□□ 0.85
CMTM3-211ENST00000565922 ADAMTS9Q9P2N4 1935 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 ATP9BO43861 1147 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 ADH1BP00325 375 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 FTLP02792 175 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-211ENST00000565922 SERPING1P05155 500 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 SKILP12757 684 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 MAPKAPK2P49137 400 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 TRIM14Q14142 442 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 NUMA1Q14980 2115 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 ACCSLQ4AC99 568 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 C9orf64Q5T6V5 341 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 IL31Q6EBC2 164 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 TCEAL6Q6IPX3 200 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 SLC23A3Q6PIS1 610 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 DGLUCYQ7Z3D6 616 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 PTPRN2Q92932 1015 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 TCEAL3Q969E4 200 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 TBC1D31Q96DN5 1066 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 CCDC114Q96M63 670 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 XPO4Q9C0E2 1151 aaKnown RBP20.37■□□□□ 0.85
CMTM3-211ENST00000565922 PABPC3Q9H361 631 aaKnown RBP20.37■□□□□ 0.85
CMTM3-211ENST00000565922 SGK2Q9HBY8 427 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 MRPL47Q9HD33 250 aaKnown RBP20.37■□□□□ 0.85
CMTM3-211ENST00000565922 HS3ST2Q9Y278 367 aa20.37■□□□□ 0.85
CMTM3-211ENST00000565922 ATXN2Q99700 1313 aaKnown RBP20.36■□□□□ 0.85
CMTM3-211ENST00000565922 LNP1A1A4G5 178 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 DDX3XO00571 662 aaKnown RBP eCLIP20.36■□□□□ 0.852e-10■■■□□ 18.2
CMTM3-211ENST00000565922 GDF9O60383 454 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 PLEKP08567 350 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-211ENST00000565922 CLCN6P51797 869 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 MAMLD1Q13495 774 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 CST6Q15828 149 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 MANEALQ5VSG8 457 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 RWDD4Q6NW29 188 aaKnown RBP20.36■□□□□ 0.85
CMTM3-211ENST00000565922 SCYL2Q6P3W7 929 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 TMC6Q7Z403 805 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 SH2D3CQ8N5H7 860 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 CCDC185Q8N715 623 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 GANCQ8TET4 914 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 FNIP1Q8TF40 1166 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 CPLX3Q8WVH0 158 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 OR8D1Q8WZ84 308 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 ZNF653Q96CK0 615 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 NCAPGQ9BPX3 1015 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 MTG2Q9H4K7 406 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 TMEM74BQ9NUR3 256 aa20.36■□□□□ 0.85
CMTM3-211ENST00000565922 CNOT8Q9UFF9 292 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms