RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TMEM74BQ9NUR3 256 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 TESMINQ9Y4I5 508 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 DTNAQ9Y4J8 743 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 KIAA0100Q14667 2235 aaKnown RBP4.61□□□□□ -1.67
LINC00561-201ENST00000565815 CLRN2A0PK11 232 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 NARSO43776 548 aaKnown RBP4.61□□□□□ -1.67
LINC00561-201ENST00000565815 KRT4P19013 534 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 BUD31P41223 144 aaPredicted RBP4.61□□□□□ -1.67
LINC00561-201ENST00000565815 MRPS5P82675 430 aaKnown RBP4.61□□□□□ -1.67
LINC00561-201ENST00000565815 MRNIPQ6NTE8 343 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 VWA1Q6PCB0 445 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 KCNV1Q6PIU1 500 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 TEKT1Q969V4 418 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 BOD1Q96IK1 185 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 FAM227BQ96M60 508 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 VN1R3Q9BXE9 311 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 PRDM8Q9NQV8 689 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 TTC41PQ6P2S7 1318 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 RAD50Q92878 1312 aa4.61□□□□□ -1.67
LINC00561-201ENST00000565815 SYCE3A1L190 88 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 E7ENX8 843 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 HIP1O00291 1037 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 POLBP06746 335 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 FOSL2P15408 326 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 RBL1P28749 1068 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 BCAT1P54687 386 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 TAP2Q03519 686 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 PTK2BQ14289 1009 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 LSM12Q3MHD2 195 aaKnown RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 C16orf89Q6UX73 402 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 Q6YL49 198 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 Q7L0L9 218 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 PEG10Q86TG7 708 aaKnown RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 TICAM2Q86XR7 235 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 RASGRP3Q8IV61 690 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 CPXCR1Q8N123 301 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 Q8N1X5 172 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 TTC9BQ8N6N2 239 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 SUN3Q8TAQ9 357 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 ZNF384Q8TF68 577 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 IPCEF1Q8WWN9 437 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 OSBPL9Q96SU4 736 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 CCDC94Q9BW85 323 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 WDR27A2RRH5 827 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 AQP7P3A6NL99 342 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 EIF3FO00303 357 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 PPFIA4O75335 1185 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 EBLN1P0CF75 366 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 NPPBP16860 134 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 PSG6Q00889 435 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 TIAL1Q01085 375 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 NSUN2Q08J23 767 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 BFSP2Q13515 415 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 RINT1Q6NUQ1 792 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 MOGAT3Q86VF5 341 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 COLGALT2Q8IYK4 626 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 SDR16C5Q8N3Y7 309 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 PDCL2Q8N4E4 241 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 MOGAT1Q96PD6 335 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 MEIS3Q99687 375 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 ALDH8A1Q9H2A2 487 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 RMI1Q9H9A7 625 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 SAP30LQ9HAJ7 183 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 TBCCD1Q9NVR7 557 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 THEGQ9P2T0 379 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 FEM1BQ9UK73 627 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 EPN1Q9Y6I3 576 aaPredicted RBP4.6□□□□□ -1.67
LINC00561-201ENST00000565815 ELP1O95163 1332 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 ALPK3Q96L96 1907 aa4.6□□□□□ -1.67
LINC00561-201ENST00000565815 KRT38O76015 456 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 VIPP01282 170 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 HLA-DOAP06340 250 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ANXA6P08133 673 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 DHRS4L1P0CG22 281 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 INSRRP14616 1297 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 MAPK4P31152 587 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 CHRNDQ07001 517 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 RAPGEF1Q13905 1077 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 MAP3K21Q5TCX8 1036 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 KLHL17Q6TDP4 642 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ERC1Q8IUD2 1116 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ARHGEF19Q8IW93 802 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 LNX2Q8N448 690 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 LRRC71Q8N4P6 559 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 CERS5Q8N5B7 392 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 SLC22A17Q8WUG5 538 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ASB12Q8WXK4 309 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 LARP4BQ92615 738 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 KIF1BPQ96EK5 621 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ZC3H10Q96K80 434 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 LENG8Q96PV6 779 aaPredicted RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 DHX36Q9H2U1 1008 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 KCTD5Q9NXV2 234 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 MORF4L1Q9UBU8 362 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 AGTPBP1Q9UPW5 1226 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 DDX60LQ5H9U9 1706 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms