RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SPAG5Q96R06 1193 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 FEM1AQ9BSK4 669 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ERVMER34-1Q9H9K5 563 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SIX2Q9NPC8 291 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ANLNQ9NQW6 1124 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 DDIT4Q9NX09 232 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SLC12A6Q9UHW9 1150 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 AJAP1Q9UKB5 411 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PPM1HQ9ULR3 514 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 RAXQ9Y2V3 346 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 CEP83Q9Y592 693 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 HS3ST4Q9Y661 456 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 COL5A1P20908 1838 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SYNJ2BP-COX16A0A087WUM0 186 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3EA0A087X179 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 GTPBP10A4D1E9 387 aaKnown RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 CBX4O00257 560 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 MCF2LO15068 1137 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 HSF2BPO75031 334 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 RTN2O75298 545 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 FGFR1OPO95684 399 aaKnown RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 ERBB2P04626 1255 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TFE3P19532 575 aaPredicted RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 ABCB4P21439 1286 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 RXRGP48443 463 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 NXPH1P58417 271 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TAS2R38P59533 333 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 CYP4F3Q08477 520 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 BNIP3Q12983 259 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 DNAJC3Q13217 504 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 EXOC3L4Q17RC7 722 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 COL28A1Q2UY09 1125 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 PTPN20Q4JDL3 420 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 AGBL4Q5VU57 503 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 SMYD5Q6GMV2 418 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 DHRS13Q6UX07 377 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 GBP6Q6ZN66 633 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 TSC1Q92574 1164 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 NT5C3BQ969T7 300 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 SKA1Q96BD8 255 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 SERAC1Q96JX3 654 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 RPRD1AQ96P16 312 aaPredicted RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 FAM204AQ9H8W3 233 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 GDF3Q9NR23 364 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 AASDHPPTQ9NRN7 309 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 COX16Q9P0S2 106 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 FTSJ1Q9UET6 329 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 VANGL2Q9ULK5 521 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 TBC1D30Q9Y2I9 924 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 PCDHGA1Q9Y5H4 931 aa8.83□□□□□ -1
CAPN3-213ENST00000565173 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
CAPN3-213ENST00000565173 TP53BP1Q12888 1972 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 DRGXA6NNA5 263 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 RNF103O00237 685 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 FOXN3O00409 490 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 ENC1O14682 589 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SLC7A4O43246 635 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 PLRG1O43660 514 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 PAGE1O75459 146 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ADCY5O95622 1261 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 LDOC1O95751 146 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 MT-CO1P00395 513 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ITGAVP06756 1048 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 PNMA6AP0CW24 399 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 EPHA8P29322 1005 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 MAT2AP31153 395 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 NOS2P35228 1153 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 GGCXP38435 758 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 NNMTP40261 264 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 USP8P40818 1118 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 OXCT1P55809 520 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 CLDN6P56747 220 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SLC6A3Q01959 620 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 CNTN1Q12860 1018 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 NME3Q13232 169 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 DLG2Q15700 870 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 CAMK4Q16566 473 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 INAVAQ3KP66 663 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 POM121L1PQ3SYA9 428 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SOWAHCQ53LP3 525 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 CCDC157Q569K6 752 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 RABGAP1LQ5R372 815 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SFMBT2Q5VUG0 894 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 OR6B2Q6IFH4 312 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms