RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 AGGF1Q8N302 714 aaeCLIP20■□□□□ 0.79
CLN6-205ENST00000564846 SPPL3Q8TCT6 385 aa20■□□□□ 0.79
CLN6-205ENST00000564846 TLR9Q9NR96 1032 aa20■□□□□ 0.79
CLN6-205ENST00000564846 RABGEF1Q9UJ41 708 aa20■□□□□ 0.79
CLN6-205ENST00000564846 A6NNZ2 444 aa20■□□□□ 0.79
CLN6-205ENST00000564846 C5orf67F2Z3F1 127 aa20■□□□□ 0.79
CLN6-205ENST00000564846 CACNG3O60359 315 aa20■□□□□ 0.79
CLN6-205ENST00000564846 SUN1O94901 812 aa20■□□□□ 0.79
CLN6-205ENST00000564846 AP2A1O95782 977 aa20■□□□□ 0.79
CLN6-205ENST00000564846 OLFM2O95897 454 aa20■□□□□ 0.79
CLN6-205ENST00000564846 GLUD1P00367 558 aa20■□□□□ 0.79
CLN6-205ENST00000564846 CPP00450 1065 aa20■□□□□ 0.79
CLN6-205ENST00000564846 GSTA2P09210 222 aa20■□□□□ 0.79
CLN6-205ENST00000564846 CORO1AP31146 461 aaKnown RBP20■□□□□ 0.79
CLN6-205ENST00000564846 HPDP32754 393 aaPredicted RBP20■□□□□ 0.79
CLN6-205ENST00000564846 MMP13P45452 471 aa20■□□□□ 0.79
CLN6-205ENST00000564846 YBEYP58557 167 aaPredicted RBP20■□□□□ 0.79
CLN6-205ENST00000564846 RASA2Q15283 850 aa20■□□□□ 0.79
CLN6-205ENST00000564846 TUBB8Q3ZCM7 444 aa20■□□□□ 0.79
CLN6-205ENST00000564846 PARP15Q460N3 678 aa20■□□□□ 0.79
CLN6-205ENST00000564846 RABGAP1LQ5R372 815 aa20■□□□□ 0.79
CLN6-205ENST00000564846 DENND1CQ8IV53 801 aa20■□□□□ 0.79
CLN6-205ENST00000564846 LGI2Q8N0V4 545 aa20■□□□□ 0.79
CLN6-205ENST00000564846 ELMOD1Q8N336 334 aa20■□□□□ 0.79
CLN6-205ENST00000564846 CNTD1Q8N815 330 aa20■□□□□ 0.79
CLN6-205ENST00000564846 MAML1Q92585 1016 aa20■□□□□ 0.79
CLN6-205ENST00000564846 SIGLEC10Q96LC7 697 aa20■□□□□ 0.79
CLN6-205ENST00000564846 PPP1R2P1Q96PQ5 205 aa20■□□□□ 0.79
CLN6-205ENST00000564846 DDX50Q9BQ39 737 aaKnown RBP20■□□□□ 0.79
CLN6-205ENST00000564846 ACSS3Q9H6R3 686 aa20■□□□□ 0.79
CLN6-205ENST00000564846 GKN1Q9NS71 199 aa20■□□□□ 0.79
CLN6-205ENST00000564846 ZC3H7BQ9UGR2 993 aaKnown RBP20■□□□□ 0.79
CLN6-205ENST00000564846 SLC24A2Q9UI40 661 aa20■□□□□ 0.79
CLN6-205ENST00000564846 PLXNA4Q9HCM2 1894 aa20■□□□□ 0.79
CLN6-205ENST00000564846 RASA4BC9J798 803 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 PSMD3O43242 534 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 RASA4O43374 803 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 RAMP2O60895 175 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 MBL2P11226 248 aaPredicted RBP19.99■□□□□ 0.79
CLN6-205ENST00000564846 NFKB1P19838 968 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 OR1E1P30953 314 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 GRIA1P42261 906 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 PPP2R2AP63151 447 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 PLPP4Q5VZY2 271 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 RTL10Q7L3V2 364 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 TAOK1Q7L7X3 1001 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 FBF1Q8TES7 1133 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 EBNA1BP2Q99848 306 aaKnown RBP19.99■□□□□ 0.79
CLN6-205ENST00000564846 GORASP1Q9BQQ3 440 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 TRPC7Q9HCX4 862 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 EURLQ9NYK6 297 aa19.99■□□□□ 0.79
CLN6-205ENST00000564846 HIDE1A8MVS5 230 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 LPXNO60711 386 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 LATS1O95835 1130 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 KLKB1P03952 638 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 RB1P06400 928 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 GABRR2P28476 465 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 SLC6A4P31645 630 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 GEMIN4P57678 1058 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 KCTD11Q693B1 232 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 KLHDC8BQ8IXV7 354 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 MRPS31Q92665 395 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 HMCESQ96FZ2 354 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 C17orf80Q9BSJ5 609 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 AGO1Q9UL18 857 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 NUP205Q92621 2012 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 SDR42E2A6NKP2 422 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 POC1B-GALNT4F8VUJ3 575 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 C1RP00736 705 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 DNAJB1P25685 340 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 GCAP28676 217 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 STX2P32856 288 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 IFNAR2P48551 515 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 ATP1A2P50993 1020 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 RENBPP51606 427 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 HNRNPDQ14103 355 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 POLD3Q15054 466 aaPredicted RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 ADGRF1Q5T601 910 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 RFWD3Q6PCD5 774 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 TMC8Q8IU68 726 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 CCNJLQ8IV13 435 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 USP33Q8TEY7 942 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 MYEOVQ96EZ4 313 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 XPO6Q96QU8 1125 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 FCRL5Q96RD9 977 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 CYTH2Q99418 400 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 LRRC3Q9BY71 257 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 CTNNAL1Q9UBT7 734 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 STOML2Q9UJZ1 356 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 AAR2Q9Y312 384 aaKnown RBP19.98■□□□□ 0.79
CLN6-205ENST00000564846 MAD1L1Q9Y6D9 718 aa19.98■□□□□ 0.79
CLN6-205ENST00000564846 TCRBV9S1A1TA0A576 114 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 AP3B1O00203 1094 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 TRDMT1O14717 391 aaKnown RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 IRF1P10914 325 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 HDCP19113 662 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 CDC25CP30307 473 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 CDH4P55283 916 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 NR1H3Q13133 447 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 GAREM2Q75VX8 874 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms