RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PIM1P11309 404 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GRIA4P48058 902 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MGAT5BQ3V5L5 792 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TIFABQ6ZNK6 161 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 AHI1Q8N157 1196 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RRN3Q9NYV6 651 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GGA3Q9NZ52 723 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SPATA31C2B4DYI2 1134 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 G3V2L1 256 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 AP1G1O43747 822 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TFEBP19484 476 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NAA20P61599 178 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 C16orf89Q6UX73 402 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FAM149AA5PLN7 773 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TRIM13O60858 407 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 UGT1A6P19224 532 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PLOD1Q02809 727 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CDK18Q07002 472 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PTK2BQ14289 1009 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PDK2Q15119 407 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SEL1L3Q68CR1 1132 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CERS2Q96G23 380 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 KCTD15Q96SI1 283 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CXCL16Q9H2A7 254 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 EPB41L1Q9H4G0 881 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 IL1RL2Q9HB29 575 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NMRAL1Q9HBL8 299 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 WDR81Q562E7 1941 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 VAPBO95292 243 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ADORA2BP29275 332 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CERCAMQ5T4B2 595 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZBTB8OSQ8IWT0 167 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CSPG4P5Q96PW8 444 aa20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FRMD8Q9BZ67 464 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SAC3D1A6NKF1 404 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MFSD11O43934 449 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GP5P40197 560 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SH3BGRP55822 239 aaPredicted RBP20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FKBP1AP62942 108 aaKnown RBP20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZPBP2Q6X784 338 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LPAR1Q92633 364 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NRBP2Q9NSY0 501 aa20.89■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NRP1O14786 923 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GCATO75600 419 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TIPRLO75663 272 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PFKMP08237 780 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 HNRNPLP14866 589 aaKnown RBP eCLIP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 AP3M2P53677 418 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NME5P56597 212 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PITX1P78337 314 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ENPEPQ07075 957 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TTC30AQ86WT1 665 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FAM149B1Q96BN6 582 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RTP4Q96DX8 246 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 P2RY11Q96G91 374 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CDT1Q9H211 546 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 STN1Q9H668 368 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF696Q9H7X3 374 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 IARS2Q9NSE4 1012 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CDC14AQ9UNH5 594 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 C9JVG2 144 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MAFGO15525 162 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GNAO1P09471 354 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 UBA1P22314 1058 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GLDCP23378 1020 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CHST15Q7LFX5 561 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FAM47BQ8NA70 645 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RPL10LQ96L21 214 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TMEM134Q9H6X4 195 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CCDC167Q9P0B6 97 aa20.89■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PTPRFP10586 1907 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GABBR2O75899 941 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ATP5BP06576 529 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CCDC166P0CW27 439 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 POTEHQ6S545 545 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF786Q8N393 782 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 KHSRPQ92945 711 aaKnown RBP eCLIP20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ARMC7Q9H6L4 198 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NUP205Q92621 2012 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NEMP2A6NFY4 417 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 POLBP06746 335 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 STAG3L1P0CL83 205 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RABGGTBP53611 331 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CBX3Q13185 183 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MPZL3Q6UWV2 235 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ADCY4Q8NFM4 1077 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 URGCPQ8TCY9 931 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 KCTD4Q8WVF5 259 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TRIM8Q9BZR9 551 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CHRAC1Q9NRG0 131 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 HESX1Q9UBX0 185 aa20.88■□□□□ 0.93
MAP1LC3B-206ENST00000564844 E7ENX8 843 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MYL4P12829 197 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZNF26P17031 533 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TSPAN8P19075 237 aa20.87■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SLC5A3P53794 718 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms