RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ACCSLQ4AC99 568 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 C9orf64Q5T6V5 341 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 IL31Q6EBC2 164 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF571Q7Z3V5 609 aaPredicted RBP18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 RABEPKQ7Z6M1 372 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 TFAP2DQ7Z6R9 452 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 CADM4Q8NFZ8 388 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 CEP76Q8TAP6 659 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 CENPIQ92674 756 aaPredicted RBP18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 MCEEQ96PE7 176 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 EDEM2Q9BV94 578 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 ZYG11BQ9C0D3 744 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 RSPH9Q9H1X1 276 aaPredicted RBP18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 TAS2R14Q9NYV8 317 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 IFNKQ9P0W0 207 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 OR12D3Q9UGF7 316 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 EVLQ9UI08 416 aaPredicted RBP18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 SCML1Q9UN30 329 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 NCKAP1Q9Y2A7 1128 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 TCRBV5S1A1TA0A578 114 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 MEI4A8MW99 385 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 C7P10643 843 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 SKILP12757 684 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF143P52747 638 aaPredicted RBP18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 HDAC4P56524 1084 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 WDR45BQ5MNZ6 344 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 STPG1Q5TH74 334 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 SCYL2Q6P3W7 929 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 GANCQ8TET4 914 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 BTBD1Q9H0C5 482 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 OSBPL2Q9H1P3 480 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 PARVAQ9NVD7 372 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 PPARGC1AQ9UBK2 798 aaKnown RBP18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 OR51B4Q9Y5P0 310 aa18.84■□□□□ 0.61
SYNGR3-204ENST00000564642 A0A1W2PQJ5 194 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 LNP1A1A4G5 178 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 FTLP02792 175 aaPredicted RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 CFIP05156 583 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 TPM3P06753 285 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 GZMAP12544 262 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 GNSP15586 552 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 PBX1P40424 430 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 VASPP50552 380 aaPredicted RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 RPL7AP62424 266 aaKnown RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 PEAR1Q5VY43 1037 aaPredicted RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 E4F1Q66K89 784 aaPredicted RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 SLC23A3Q6PIS1 610 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 SLFN11Q7Z7L1 901 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 MMAAQ8IVH4 418 aaKnown RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 STK40Q8N2I9 435 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 PTPRN2Q92932 1015 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 IQCDQ96DY2 449 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 C2orf49Q9BVC5 232 aaPredicted RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 TSPY26PQ9H489 355 aa18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 NYNRINQ9P2P1 1898 aaKnown RBP18.83■□□□□ 0.6
SYNGR3-204ENST00000564642 PI4KAP42356 2102 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 DCDC2BA2VCK2 349 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 METTL12A8MUP2 240 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 CCP110O43303 1012 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 MAOBP27338 520 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 ACSL1P33121 698 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 NRG1Q02297 640 aaPredicted RBP18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 CST6Q15828 149 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 PPP1R15BQ5SWA1 713 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 DCAF12L1Q5VU92 463 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 RWDD4Q6NW29 188 aaKnown RBP18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 ZNF783Q6ZMS7 281 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 CCDC185Q8N715 623 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM129BQ96TA1 746 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 CNPY3Q9BT09 278 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 PABPC3Q9H361 631 aaKnown RBP18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 SUSD2Q9UGT4 822 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 SLC6A14Q9UN76 642 aa18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 BZW2Q9Y6E2 419 aaKnown RBP18.82■□□□□ 0.6
SYNGR3-204ENST00000564642 NCOR2Q9Y618 2525 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 PKD1L2Q7Z442 2459 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 CHD8Q9HCK8 2581 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 ILVBLA1L0T0 632 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 DDX3XO00571 662 aaKnown RBP eCLIP18.81■□□□□ 0.62e-10■■■■■ 55.9
SYNGR3-204ENST00000564642 ATP9BO43861 1147 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 RTN2O75298 545 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 PLEKP08567 350 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SERPINF2P08697 491 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SLC8A1P32418 973 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 ZBED6P86452 979 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 GFPT1Q06210 699 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 MAMLD1Q13495 774 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 ELAVL3Q14576 367 aaKnown RBP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 DLG2Q15700 870 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 USP30Q70CQ3 517 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 VPS36Q86VN1 386 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 DRC7Q8IY82 874 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 ATP11CQ8NB49 1132 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 FRS2Q8WU20 508 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SYN2Q92777 582 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 NTAN1Q96AB6 310 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms