RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 C10orf76Q5T2E6 689 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 KLBQ86Z14 1044 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 PAQR4Q8N4S7 273 aaPredicted RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 FAM98AQ8NCA5 519 aaKnown RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 RFWD2Q8NHY2 731 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 OSR1Q8TAX0 266 aaPredicted RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 ZFPM2Q8WW38 1151 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 RFFLQ8WZ73 363 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 IP6K1Q92551 441 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 NPLQ9BXD5 320 aaPredicted RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 INTS2Q9H0H0 1204 aaKnown RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 RIOX1Q9H6W3 641 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 TTC12Q9H892 705 aaPredicted RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 MLXIPLQ9NP71 852 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 TMEM248Q9NWD8 314 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 IPO11Q9UI26 975 aaKnown RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 TNFSF13BQ9Y275 285 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 WDR33Q9C0J8 1336 aaKnown RBP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 TNPO2O14787 897 aaKnown RBP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 TSPAN4O14817 238 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 SPTLC2O15270 562 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 RPS6KB1P23443 525 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 HOXA7P31268 230 aaPredicted RBP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 CCT4P50991 539 aaKnown RBP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 IL13RA2Q14627 380 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 FAM69AQ5T7M9 428 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 WDR78Q5VTH9 848 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 FBXO42Q6P3S6 717 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ZNF813Q6ZN06 617 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 C1orf122Q6ZSJ8 110 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ARMC8Q8IUR7 673 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ZNF366Q8N895 744 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 C8orf58Q8NAV2 365 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ZCCHC10Q8TBK6 192 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ELP4Q96EB1 424 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 CADM1Q9BY67 442 aaKnown RBP5.1□□□□□ -1.59
LINC00560-201ENST00000564593 SLC8A2Q9UPR5 921 aa5.1□□□□□ -1.59
LINC00560-201ENST00000564593 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 TCRBV7S3A2A0A539 114 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 KCNJ18B7U540 433 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 RTN3O95197 1032 aaPredicted RBP5.09□□□□□ -1.59
LINC00560-201ENST00000564593 NUDT3O95989 172 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 HLA-DQA2P01906 255 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 GJC1P36383 396 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 CDH15P55291 814 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 ZBTB16Q05516 673 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 SEMA3AQ14563 771 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 DSTYKQ6XUX3 929 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 ARL14EPQ8N8R7 260 aaPredicted RBP5.09□□□□□ -1.59
LINC00560-201ENST00000564593 TNIP2Q8NFZ5 429 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 CNOT9Q92600 299 aaKnown RBP5.09□□□□□ -1.59
LINC00560-201ENST00000564593 MAP4K1Q92918 833 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 C5orf34Q96MH7 638 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 EYA3Q99504 573 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 CLSTN3Q9BQT9 956 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 TTYH1Q9H313 450 aaPredicted RBP5.09□□□□□ -1.59
LINC00560-201ENST00000564593 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 VEZTQ9HBM0 779 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 OLA1Q9NTK5 396 aaKnown RBP5.09□□□□□ -1.59
LINC00560-201ENST00000564593 UPB1Q9UBR1 384 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 AASSQ9UDR5 926 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 CNPY2Q9Y2B0 182 aa5.09□□□□□ -1.59
LINC00560-201ENST00000564593 GOLGA6L10A0A0M3HER8 536 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SLC22A23A1A5C7 686 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 LINC01548A6NM66 108 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 STRNO43815 780 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 HBP1O60381 514 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 NFATC1O95644 943 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CD63P08962 238 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 TFEBP19484 476 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 STAT1P42224 750 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MTNR1AP48039 350 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 RXRGP48443 463 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 RHAGQ02094 409 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF268Q14587 947 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 HYIQ5T013 277 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 UBAP2Q5T6F2 1119 aaKnown RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 NAPEPLDQ6IQ20 393 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 AADACL2Q6P093 401 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 GJB7Q6PEY0 223 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 R3HCC1LQ7Z5L2 792 aaKnown RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 TBC1D1Q86TI0 1168 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CHD1LQ86WJ1 897 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 HASPINQ8TF76 798 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 NOC3LQ8WTT2 800 aaKnown RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 C7orf26Q96N11 449 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 LMAN2LQ9H0V9 348 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 Q9N2J8 555 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 BEX4Q9NWD9 120 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 HDAC6Q9UBN7 1215 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 SLC25A10Q9UBX3 287 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 CXorf65A6NEN9 183 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MANSC4A6NHS7 340 aaPredicted RBP5.08□□□□□ -1.6
LINC00560-201ENST00000564593 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 PER2O15055 1255 aa5.08□□□□□ -1.6
LINC00560-201ENST00000564593 MSI1O43347 362 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms