RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 NCOA4Q13772 614 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 INTS8Q75QN2 995 aaKnown RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 CLEC14AQ86T13 490 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 TMC2Q8TDI7 906 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 GRAMD1AQ96CP6 724 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
RNF40-205ENST00000563909 ENTPD2Q9Y5L3 495 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 CENPEQ02224 2701 aa16.48■□□□□ 0.23
RNF40-205ENST00000563909 SYCE3A1L190 88 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 CLEC18AA5D8T8 446 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
RNF40-205ENST00000563909 PPFIA2O75334 1257 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 GNA14O95837 355 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 THEGLP0DJG4 465 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 GIMD1P0DJR0 217 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 ALPPL2P10696 532 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 AP3M2P53677 418 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 C9orf64Q5T6V5 341 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 CLEC18BQ6UXF7 455 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 CLEC18CQ8NCF0 446 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 IFI44Q8TCB0 444 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 PLEKHO2Q8TD55 490 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 PLD4Q96BZ4 506 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 EEF2KMTQ96G04 330 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 MYO19Q96H55 970 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
RNF40-205ENST00000563909 METTL14Q9HCE5 456 aaKnown RBP16.47■□□□□ 0.23
RNF40-205ENST00000563909 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 CA5BQ9Y2D0 317 aa16.47■□□□□ 0.23
RNF40-205ENST00000563909 LY6G6EA0A0G2JKS1 128 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 C4BPAP04003 597 aaKnown RBP16.46■□□□□ 0.23
RNF40-205ENST00000563909 P4HA1P13674 534 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 HARS2P49590 506 aaKnown RBP16.46■□□□□ 0.23
RNF40-205ENST00000563909 VAMP7P51809 220 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 IGFBP7Q16270 282 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 POM121L1PQ3SYA9 428 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.46■□□□□ 0.23
RNF40-205ENST00000563909 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
RNF40-205ENST00000563909 WFDC5Q8TCV5 224 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 ARRDC3Q96B67 414 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 CYFIP2Q96F07 1278 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 KLHDC7BQ96G42 594 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 FAM129BQ96TA1 746 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 CAAP1Q9H8G2 361 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 USP29Q9HBJ7 922 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 EVA1BQ9NVM1 165 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 CYTH4Q9UIA0 394 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 DMTF1Q9Y222 760 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 USP3Q9Y6I4 520 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 U3KQA8 63 aa16.46■□□□□ 0.23
RNF40-205ENST00000563909 ABCA12Q86UK0 2595 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 BLACEA4D250 179 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 IKBKBO14920 756 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 VNN1O95497 513 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 C5AR1P21730 350 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 SGSHP51688 502 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 ZNF445P59923 1031 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 MCCD1P59942 119 aaPredicted RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 CLDN10P78369 228 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 TRIP4Q15650 581 aaPredicted RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 TBR1Q16650 682 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 CCDC40Q4G0X9 1142 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 ADGRF1Q5T601 910 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 HIST2H2BCQ6DN03 193 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 RBM44Q6ZP01 1051 aaKnown RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 UNC93AQ86WB7 457 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 WDR36Q8NI36 951 aaKnown RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 TTC17Q96AE7 1141 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 MED15Q96RN5 788 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 SLC25A18Q9H1K4 315 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 NLGN3Q9NZ94 848 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
RNF40-205ENST00000563909 LRBAP50851 2863 aa16.45■□□□□ 0.22
RNF40-205ENST00000563909 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 TTC34A8MYJ7 566 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 STX10O60499 249 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 PIAS2O75928 621 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 ADH1BP00325 375 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 IL1BP01584 269 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 TRIM21P19474 475 aaKnown RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 NUDT1P36639 197 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 MLLT3P42568 568 aaPredicted RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 CCR10P46092 362 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 FOXK1P85037 733 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 KCNMA1Q12791 1236 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 SRSF6Q13247 344 aaKnown RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 ARID5BQ14865 1188 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 TGIF1Q15583 401 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 C11orf57Q6ZUT1 292 aaPredicted RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 PTRH1Q86Y79 214 aaKnown RBP16.44■□□□□ 0.22
RNF40-205ENST00000563909 FAM114A1Q8IWE2 563 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms