RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 F9P00740 461 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 IGHV4-34P06331 123 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 C7P10643 843 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 SCNN1AP37088 669 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 PLK1P53350 603 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 COPB1P53618 953 aaKnown RBP18.17■□□□□ 0.5
NME3-205ENST00000563854 CDH4P55283 916 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 STX1AQ16623 288 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 KIF19Q2TAC6 998 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 SLC25A52Q3SY17 297 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 ALFQ53S48 1182 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 TRNP1Q6NT89 227 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 LRRC31Q6UY01 552 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 RBM43Q6ZSC3 357 aaKnown RBP18.17■□□□□ 0.5
NME3-205ENST00000563854 Q6ZVU0 165 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 TFAP2DQ7Z6R9 452 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 EMC1Q8N766 993 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 OR14C36Q8NHC7 312 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 SLC6A18Q96N87 628 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 NOCTQ9UK39 431 aaKnown RBP18.17■□□□□ 0.5
NME3-205ENST00000563854 FZD4Q9ULV1 537 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 ANKRD6Q9Y2G4 727 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 C1QTNF9BB2RNN3 333 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 I6L893 689 aaPredicted RBP18.16■□□□□ 0.5
NME3-205ENST00000563854 PLK4O00444 970 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 KCNK3O14649 394 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 C1QTNF9P0C862 333 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 C5AR1P21730 350 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 RDXP35241 583 aaKnown RBP18.16■□□□□ 0.5
NME3-205ENST00000563854 SOX5P35711 763 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 GRIA4P48058 902 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 METAP1P53582 386 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 ATP11AP98196 1134 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 CDR2Q01850 454 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 MYL5Q02045 173 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 HNRNPDQ14103 355 aaKnown RBP18.16■□□□□ 0.5
NME3-205ENST00000563854 SYCP1Q15431 976 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
NME3-205ENST00000563854 CDO1Q16878 200 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 UNQ6494/PRO21346Q6UXR6 183 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 FAM131BQ86XD5 332 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 ZNF677Q86XU0 584 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 OR2T34Q8NGX1 318 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 SLC30A5Q8TAD4 765 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 FRS2Q8WU20 508 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 OR8D1Q8WZ84 308 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 ALG14Q96F25 216 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 C11orf70Q9BRQ4 267 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 AASDHPPTQ9NRN7 309 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 MPP6Q9NZW5 540 aa18.16■□□□□ 0.5
NME3-205ENST00000563854 CACNA1EQ15878 2313 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 SNAP91O60641 907 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 SRGAP2O75044 1071 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 KRT37O76014 449 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 GOT1P17174 413 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 CDK11BP21127 795 aaKnown RBP18.15■□□□□ 0.5
NME3-205ENST00000563854 STAT1P42224 750 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 ADPRHP54922 357 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 C21orf59P57076 290 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 IL9RQ01113 521 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 FMO1Q01740 532 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 DLG2Q15700 870 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.15■□□□□ 0.5
NME3-205ENST00000563854 DSG4Q86SJ6 1040 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 NT5C3BQ969T7 300 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 PGAP3Q96FM1 320 aaPredicted RBP18.15■□□□□ 0.5
NME3-205ENST00000563854 SEPT11Q9NVA2 429 aaKnown RBP18.15■□□□□ 0.5
NME3-205ENST00000563854 ADAMTS1Q9UHI8 967 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 TMEM59LQ9UK28 342 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 KLK13Q9UKR3 277 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 OR51B4Q9Y5P0 310 aa18.15■□□□□ 0.5
NME3-205ENST00000563854 KMT2BQ9UMN6 2715 aaPredicted RBP18.15■□□□□ 0.5
NME3-205ENST00000563854 MAP1BP46821 2468 aaKnown RBP18.14■□□□□ 0.5
NME3-205ENST00000563854 PLXNA2O75051 1894 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3DA0A087WVF3 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3IA0A087WXS9 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3EA0A087X179 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3KA0A087X1G2 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 A0A1W2PPC4 97 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3FA6NER0 549 aaPredicted RBP18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3LB9A6J9 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 E9PAM4 449 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 ATP9BO43861 1147 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 GJB6O95452 261 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3HP0C7X1 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 CHRNB2P17787 502 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 JAM2P57087 298 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 KRT83P78385 493 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 UBXN1Q04323 297 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 C5orf22Q49AR2 442 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3GQ6DHY5 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3CQ6IPX1 549 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 TBC1D3Q8IZP1 549 aaPredicted RBP18.14■□□□□ 0.49
NME3-205ENST00000563854 CHCHD4Q8N4Q1 142 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 SH2D3CQ8N5H7 860 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 PNPLA1Q8N8W4 532 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 ATP11CQ8NB49 1132 aa18.14■□□□□ 0.49
NME3-205ENST00000563854 PSMB7Q99436 277 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms