RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 IMPG1Q17R60 797 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 MTX3Q5HYI7 312 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 GLRA4Q5JXX5 417 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ZBTB38Q8NAP3 1195 aaPredicted RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 MCOLN3Q8TDD5 553 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 FAM20AQ96MK3 541 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ADAMTS10Q9H324 1103 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 DGKBQ9Y6T7 804 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 SDR42E2A6NKP2 422 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 YKT6O15498 198 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 HS6ST1O60243 411 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 A1BGP04217 495 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 RBP1P09455 135 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 PABPC1LQ4VXU2 614 aaKnown RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 FAM91A1Q658Y4 838 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 PYHIN1Q6K0P9 492 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 UGT3A1Q6NUS8 523 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 C16orf46Q6P387 395 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 CNSTQ6PJW8 725 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 MIER2Q8N344 545 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ZNF540Q8NDQ6 660 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ITFG1Q8TB96 612 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 CENPIQ92674 756 aaPredicted RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 NODALQ96S42 347 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 HTATIP2Q9BUP3 242 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 TMEM117Q9H0C3 514 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 MED11Q9P086 117 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 FAM240BA0A1B0GVZ2 78 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 GSAPA4D1B5 854 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 MYL12BO14950 172 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 MDM4O15151 490 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 FKBP9O95302 570 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 POU5F1BQ06416 359 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ZNF267Q14586 743 aaPredicted RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 OTUD3Q5T2D3 398 aaPredicted RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 PMF1Q6P1K2 205 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 TMEM17Q86X19 198 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 HERC6Q8IVU3 1022 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 SVOPLQ8N434 492 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 RNF145Q96MT1 663 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 PHF12Q96QT6 1004 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 CPNE1Q99829 537 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 DRG1Q9Y295 367 aaKnown RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 PCDHGA11Q9Y5H2 935 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 SLIT1O75093 1534 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 EMSYQ7Z589 1322 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 PSAPP07602 524 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 RASA1P20936 1047 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 HOXC9P31274 260 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 GNA12Q03113 381 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 ELP6Q0PNE2 266 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 GRTP1Q5TC63 336 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 TYW3Q6IPR3 259 aaKnown RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 CAND1Q86VP6 1230 aaKnown RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 OR8K3Q8NH51 312 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 SLC22A8Q8TCC7 542 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 RASGRP4Q8TDF6 673 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 FSD1LQ9BXM9 530 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 TLE6Q9H808 572 aa6.36□□□□□ -1.39
CLK3-212ENST00000563418 INTS10Q9NVR2 710 aaKnown RBP6.36□□□□□ -1.39
CLK3-212ENST00000563418 K7ERI5 159 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 ATMINO43313 823 aaPredicted RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 OAS1P00973 400 aaKnown RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 PGS1Q32NB8 556 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 ZNF773Q6PK81 442 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 LARGE2Q8N3Y3 721 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 PPHLN1Q8NEY8 458 aaKnown RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 CEP295NLQ96MC4 621 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 STRBPQ96SI9 672 aaKnown RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 GPN1Q9HCN4 374 aaPredicted RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 NDUFAF4Q9P032 175 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 PDE10AQ9Y233 779 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 ANKRD26Q9UPS8 1709 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 KRBA1A5PL33 1030 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 METTL21EPA6NDL7 271 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 PRR5-ARHGAP8B1AHC4 643 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 EIF3FO00303 357 aaPredicted RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 CSPG5O95196 566 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 C8BP07358 591 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 ETS1P14921 441 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 SLC16A2P36021 539 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 RPS9P46781 194 aaKnown RBP6.35□□□□□ -1.39
CLK3-212ENST00000563418 ARHGAP8P85298 464 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 STX4Q12846 297 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 IL18R1Q13478 541 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 AGKQ53H12 422 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 LINC00299Q6ZSB3 139 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 FGD2Q7Z6J4 655 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 ASB9Q96DX5 294 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 CLPBQ9H078 707 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 MYH7P12883 1935 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 USP17L12C9JPN9 530 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 USP17L21D6R901 530 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 H0YGN5 161 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 POU1F1P28069 291 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 S100A2P29034 98 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 MAPK10P53779 464 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 AP3S2P59780 193 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms