RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SYTL1Q8IYJ3 562 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 C1QTNF7Q9BXJ2 289 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 STK33Q9BYT3 514 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 ABHD10Q9NUJ1 306 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 VPS4AQ9UN37 437 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 BTBD3Q9Y2F9 522 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 DAAM1Q9Y4D1 1078 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 PCDHB2Q9Y5E7 798 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 UTRNP46939 3433 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 INO80B-WBP1J3KQ70 363 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 PLA2G6O60733 806 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 MBPP02686 304 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 CYP19A1P11511 503 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 ABCB4P21439 1286 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 ATP5F1P24539 256 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 CRKLP46109 303 aaKnown RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 RIPK4P57078 832 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 LMOD3Q0VAK6 560 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 CBFBQ13951 182 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 TAF7Q15545 349 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 FAM83BQ5T0W9 1011 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 SLC2A7Q6PXP3 512 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 TTC5Q8N0Z6 440 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 OR52L2PQ8NGH6 319 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 MUL1Q969V5 352 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 PRR11Q96HE9 360 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 TMEM8AQ9HCN3 771 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 PTPRHQ9HD43 1115 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 TUBA8Q9NY65 449 aaPredicted RBP5.52□□□□□ -1.53
LINC00254-201ENST00000563416 SEMA5BQ9P283 1151 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 SLC39A10Q9ULF5 831 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 DTNAQ9Y4J8 743 aa5.52□□□□□ -1.53
LINC00254-201ENST00000563416 FER1L6Q2WGJ9 1857 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 DDX60Q8IY21 1712 aaKnown RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 PNMA6EA0A0J9YXQ4 647 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 E5RJQ4 531 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 J3KTA2 159 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 FCHO1O14526 889 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 NPHP1O15259 732 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 TECP42680 631 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 PLCD1P51178 756 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 HSF1Q00613 529 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 STARD3Q14849 445 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 KPNB1Q14974 876 aaKnown RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 KRT72Q14CN4 511 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 ERAP2Q6P179 960 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 AKAP1Q92667 903 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 THUMPD2Q9BTF0 503 aaKnown RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 TEX13AQ9BXU3 409 aaPredicted RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 FBXO28Q9NVF7 368 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 BABAM1Q9NWV8 329 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 FNIP2Q9P278 1114 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 RNF7Q9UBF6 113 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 ZBTB1Q9Y2K1 713 aa5.51□□□□□ -1.53
LINC00254-201ENST00000563416 UBE2J1Q9Y385 318 aaPredicted RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 HEMK1Q9Y5R4 338 aaPredicted RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 SIRT4Q9Y6E7 314 aaPredicted RBP5.51□□□□□ -1.53
LINC00254-201ENST00000563416 USP42Q9H9J4 1324 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 TNRC6CQ9HCJ0 1690 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 C10orf71Q711Q0 1435 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 CTIFO43310 598 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 NTSR2O95665 410 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 CD63P08962 238 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 ALDH18A1P54886 795 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 EIF5P55010 431 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 GLE1Q53GS7 698 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PXDC1Q5TGL8 231 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PIK3AP1Q6ZUJ8 805 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 SMIM5Q71RC9 77 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 C1QL2Q7Z5L3 287 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 UEVLDQ8IX04 471 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 MYRIPQ8NFW9 859 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PIGOQ8TEQ8 1089 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 GLMPQ8WWB7 406 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 TMEM41AQ96HV5 264 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 ZNF778Q96MU6 729 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 SENP7Q9BQF6 1050 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PPCSQ9HAB8 311 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PLCB1Q9NQ66 1216 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 ANAPC4Q9UJX5 808 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 PNMA2Q9UL42 364 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 MAGED2Q9UNF1 606 aaPredicted RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 RRP7AQ9Y3A4 280 aaKnown RBP5.5□□□□□ -1.53
LINC00254-201ENST00000563416 TNFRSF18Q9Y5U5 241 aa5.5□□□□□ -1.53
LINC00254-201ENST00000563416 TAF1P21675 1872 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 SPEF2Q9C093 1822 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 CCDC187A0A096LP49 1063 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 CHL1O00533 1208 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 NPC1O15118 1278 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 INPPL1O15357 1258 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 STARD3NLO95772 234 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 ZNF853P0CG23 659 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 GYS1P13807 737 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 CD53P19397 219 aa5.49□□□□□ -1.53
LINC00254-201ENST00000563416 SFPQP23246 707 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00254-201ENST00000563416 SLC8A1P32418 973 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms