RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SPATA22Q8NHS9 363 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 PPM1EQ8WY54 764 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 APBB2Q92870 758 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 GRAMD1AQ96CP6 724 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 SLC13A1Q9BZW2 595 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 VPS11Q9H270 941 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 RASSF4Q9H2L5 321 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 F7P08709 466 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 TPH1P17752 444 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 HTR7P34969 479 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 PSMD5Q16401 504 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 FAM133BQ5BKY9 247 aaKnown RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 AFMIDQ63HM1 303 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 DEFB128Q7Z7B8 93 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 ZNF683Q8IZ20 524 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 RTL3Q8N8U3 475 aaKnown RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 ZNF669Q96BR6 464 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 MTBPQ96DY7 904 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 NAT9Q9BTE0 207 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 SEZ6LQ9BYH1 1024 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 MYLKQ15746 1914 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 HGSO14964 777 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ADAM12O43184 909 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ATP9BO43861 1147 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 UBOX5O94941 541 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 POLBP06746 335 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 SERPINB9P50453 376 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 NRG1Q02297 640 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ZNF33AQ06730 810 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 DUSP4Q13115 394 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 RASSF3Q86WH2 238 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 MIB1Q86YT6 1006 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ARHGAP18Q8N392 663 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 CERS2Q96G23 380 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 HIPK3Q9H422 1215 aa19.52■□□□□ 0.72
SMPD3-203ENST00000563226 NOL6Q9H6R4 1146 aaKnown RBP19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ACTR5Q9H9F9 607 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-203ENST00000563226 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMPD3-203ENST00000563226 ERI2A8K979 691 aaKnown RBP19.52■□□□□ 0.71
SMPD3-203ENST00000563226 CACNG3O60359 315 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 MT-CYBP00156 380 aaPredicted RBP19.52■□□□□ 0.71
SMPD3-203ENST00000563226 MS4A13Q5J8X5 152 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 SPANXN3Q5MJ09 141 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.52■□□□□ 0.71
SMPD3-203ENST00000563226 TFAP2DQ7Z6R9 452 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 LZTR1Q8N653 840 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 SPPL2BQ8TCT7 592 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 GIPC2Q8TF65 315 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 IL12RB2Q99665 862 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 MANSC1Q9H8J5 431 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 LRRC40Q9H9A6 602 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 BFARQ9NZS9 450 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 PLLPQ9Y342 182 aa19.52■□□□□ 0.71
SMPD3-203ENST00000563226 UPP2O95045 317 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 HMBSP08397 361 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 HAPLN1P10915 354 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-203ENST00000563226 BGNP21810 368 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 SERPINB4P48594 390 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 PAPOLAP51003 745 aaKnown RBP19.51■□□□□ 0.71
SMPD3-203ENST00000563226 CHSY1Q86X52 802 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 KLHDC8BQ8IXV7 354 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 NDUFAF2Q8N183 169 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 FITM2Q8N6M3 262 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 CDKL2Q92772 493 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 MFSD3Q96ES6 412 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 C1orf74Q96LT6 269 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 TMEM175Q9BSA9 504 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 TTPALQ9BTX7 342 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 MRPL9Q9BYD2 267 aaKnown RBP19.51■□□□□ 0.71
SMPD3-203ENST00000563226 KLHL14Q9P2G3 628 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 SLC12A4Q9UP95 1085 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 CDY1Q9Y6F8 540 aa19.51■□□□□ 0.71
SMPD3-203ENST00000563226 ZCWPW2A0A1B0GU75 182 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 MATN3O15232 486 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 HOXA2O43364 376 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 CNTN5O94779 1100 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 CXCL10P02778 98 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ALDOAP04075 364 aaKnown RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ALFQ53S48 1182 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 TIFABQ6ZNK6 161 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 TMEM135Q86UB9 458 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 MECRQ9BV79 373 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 IQCGQ9H095 443 aaKnown RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 RNF208Q9H0X6 261 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 PRDM5Q9NQX1 630 aaPredicted RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 MKS1Q9NXB0 559 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 CLIC5Q9NZA1 410 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 MKI67P46013 3256 aaKnown RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 RTN3O95197 1032 aaPredicted RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 HLA-DQB2P05538 268 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 RPL17P18621 184 aaKnown RBP19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ATF6P18850 670 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 OVGP1Q12889 678 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 PRPSAP1Q14558 356 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ANKRD20A4Q4UJ75 823 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 C10orf120Q5SQS8 335 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ARMC2Q8NEN0 867 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms