RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ITPKBP27987 946 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.32
CMTM3-205ENST00000562707 NUMBP49757 651 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 CDK17Q00537 523 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 MEA1Q16626 185 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 TMEM110Q86TL2 294 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 SPATS2Q86XZ4 545 aaKnown RBP17.08■□□□□ 0.32
CMTM3-205ENST00000562707 FRS2Q8WU20 508 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 BAP1Q92560 729 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 KREMEN1Q96MU8 473 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 ARHGAP20Q9P2F6 1191 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 SLC25A13Q9UJS0 675 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 URB1O60287 2271 aaKnown RBP17.08■□□□□ 0.32
CMTM3-205ENST00000562707 CABIN1Q9Y6J0 2220 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 C1QTNF3-AMACRE9PGA6 284 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 THAP12O43422 761 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 PLRG1O43660 514 aaKnown RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 GNA14O95837 355 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 IGLV3-25P01717 112 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 CCR1P32246 355 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 C19orf57Q0VDD7 668 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 SETMARQ53H47 684 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 CIR1Q86X95 450 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 ZNF606Q8WXB4 792 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 FAM131CQ96AQ9 280 aa17.07■□□□□ 0.32
CMTM3-205ENST00000562707 RPRD1AQ96P16 312 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 UBE2TQ9NPD8 197 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-205ENST00000562707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 PRAMEF26H0Y7S4 382 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 TLX3O43711 291 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 ATP9BO43861 1147 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 GLDCP23378 1020 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 METAP1P53582 386 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 E2F1Q01094 437 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 CNTN1Q12860 1018 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 MTA1Q13330 715 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 ZNF177Q13360 481 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 EIF4EBP2Q13542 120 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 DLG2Q15700 870 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 KANSL1Q7Z3B3 1105 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 TRIM69Q86WT6 500 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 CACTIN-AS1Q8N1I8 211 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 KLHDC7BQ96G42 594 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 PRORYQ9H606 182 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 DDIT4Q9NX09 232 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 SARDHQ9UL12 918 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
CMTM3-205ENST00000562707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
CMTM3-205ENST00000562707 CELSR3Q9NYQ7 3312 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 TK2O00142 265 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 MCF2LO15068 1137 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 ALOX15BO15296 676 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 SDC3O75056 442 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 GLI1P08151 1106 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 GNA15P30679 374 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 PITX1P78337 314 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-205ENST00000562707 CCDC15Q0P6D6 951 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 POM121L1PQ3SYA9 428 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 EFHC1Q5JVL4 640 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
CMTM3-205ENST00000562707 FBXL22Q6P050 247 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 FOXR2Q6PJQ5 311 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 ENOSF1Q7L5Y1 443 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 DEFB106AQ8N104 65 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 SLC39A7Q92504 469 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 FGF11Q92914 225 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 FEM1AQ9BSK4 669 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 VPS28Q9UK41 221 aa17.05■□□□□ 0.32
CMTM3-205ENST00000562707 FARP1Q9Y4F1 1045 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-205ENST00000562707 BNIP3LO60238 219 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 RNGTTO60942 597 aaKnown RBP17.04■□□□□ 0.32
CMTM3-205ENST00000562707 ACP1P24666 158 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 ACTN2P35609 894 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 DAB2P98082 770 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 PDCLQ13371 301 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-205ENST00000562707 AUHQ13825 339 aaKnown RBP17.04■□□□□ 0.32
CMTM3-205ENST00000562707 TAF5Q15542 800 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 PROX2Q3B8N5 592 aa17.04■□□□□ 0.32
CMTM3-205ENST00000562707 AGBL4Q5VU57 503 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms