RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TTC31Q49AM3 519 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-206ENST00000562610 LYSMD4Q5XG99 296 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 METTL3Q86U44 580 aaKnown RBP16.56■□□□□ 0.24
COMMD4-206ENST00000562610 FAM124AQ86V42 546 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 VSTM4Q8IW00 320 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 PIGKQ92643 395 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 TBC1D31Q96DN5 1066 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 C2orf49Q9BVC5 232 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-206ENST00000562610 OSBPL2Q9H1P3 480 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 PPARGC1AQ9UBK2 798 aaKnown RBP16.56■□□□□ 0.24
COMMD4-206ENST00000562610 PLXNA2O75051 1894 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 A0A087X0T9 212 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 FAM72CH0Y354 149 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 RNASEH1O60930 286 aaKnown RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 LRIG2O94898 1065 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 FAM228BP0C875 321 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 RPS14P62263 151 aaKnown RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 NRG1Q02297 640 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 SCAPQ12770 1279 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 ACCSLQ4AC99 568 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 FAM72AQ5TYM5 149 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 MANEALQ5VSG8 457 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 FAM72DQ6L9T8 149 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 FAM72BQ86X60 149 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 DCAF4L2Q8NA75 395 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 OR7D4Q8NG98 312 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 ALG14Q96F25 216 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 TOE1Q96GM8 510 aaKnown RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 HSPA12BQ96MM6 686 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 MAGEB5Q9BZ81 275 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 TRIM7Q9C029 511 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 ISCUQ9H1K1 167 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 RSPH9Q9H1X1 276 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 MRPL47Q9HD33 250 aaKnown RBP16.55■□□□□ 0.24
COMMD4-206ENST00000562610 ITM2CQ9NQX7 267 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 VPS45Q9NRW7 570 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 ARHGAP20Q9P2F6 1191 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 OR51B4Q9Y5P0 310 aa16.55■□□□□ 0.24
COMMD4-206ENST00000562610 A0A0D9SEW6 157 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 TARSL2A2RTX5 802 aaKnown RBP16.54■□□□□ 0.24
COMMD4-206ENST00000562610 TMEM191CA6NGB0 347 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 MEI4A8MW99 385 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 CREB3O43889 395 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 SNAP91O60641 907 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF806P0C7X5 589 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 VAV1P15498 845 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 OXTRP30559 389 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 PSMD8P48556 350 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 AIF1P55008 147 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF33AQ06730 810 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF252P-AS1Q0IIN9 211 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ARID5BQ14865 1188 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 SPDYCQ5MJ68 293 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 PLA2G2CQ5R387 149 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ARTNQ5T4W7 220 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 C9orf64Q5T6V5 341 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 TCEAL6Q6IPX3 200 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 TCEAL3Q969E4 200 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 PSMB7Q99436 277 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 GPR174Q9BXC1 333 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 TRIM5Q9C035 493 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ATP13A1Q9HD20 1204 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF212Q9UDV6 495 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 DNAI1Q9UI46 699 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 VPS51Q9UID3 782 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 FZD10Q9ULW2 581 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 GON4LQ3T8J9 2241 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 DMXL1Q9Y485 3027 aa16.54■□□□□ 0.24
COMMD4-206ENST00000562610 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 CBX4O00257 560 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 BNIP3LO60238 219 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 FOXD2O60548 495 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 MFAP3LO75121 409 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 RNF8O76064 485 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 RHOQP17081 205 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ITPKAP23677 461 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 EIF4A3P38919 411 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 MAPKAPK2P49137 400 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 GNA12Q03113 381 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ZBTB16Q05516 673 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ELAVL3Q14576 367 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 CST6Q15828 149 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 CCDC122Q5T0U0 273 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ALKBH5Q6P6C2 394 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 LINGO4Q6UY18 593 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF783Q6ZMS7 281 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 Q6ZVU0 165 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 MMAAQ8IVH4 418 aaKnown RBP16.53■□□□□ 0.24
COMMD4-206ENST00000562610 SLC41A1Q8IVJ1 513 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 ATP11CQ8NB49 1132 aa16.53■□□□□ 0.24
COMMD4-206ENST00000562610 GANCQ8TET4 914 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms