RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GOT1P17174 413 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 EPHB2P29323 1055 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 OR1E1P30953 314 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 DGKEP52429 567 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 ECT2LQ008S8 904 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 GNA12Q03113 381 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 CAMK2GQ13555 558 aaPredicted RBP13.77□□□□□ -0.21
CDH1-204ENST00000562118 SMTNL2Q2TAL5 461 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 KCNT1Q5JUK3 1230 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 TFAP2DQ7Z6R9 452 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 SORCS1Q8WY21 1168 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 ARHGEF2Q92974 986 aaKnown RBP13.77□□□□□ -0.21
CDH1-204ENST00000562118 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 ZNF670Q9BS34 389 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 MAGEH1Q9H213 219 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 DHX35Q9H5Z1 703 aaKnown RBP13.77□□□□□ -0.21
CDH1-204ENST00000562118 CATSPERBQ9H7T0 1116 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDH1-204ENST00000562118 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 STON1Q9Y6Q2 735 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
CDH1-204ENST00000562118 A0A0U1RQJ8 604 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 ATP9BO43861 1147 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 MOCS3O95396 460 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 CD160O95971 181 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 COL9A1P20849 921 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 PRKCHP24723 683 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 ETFBP38117 255 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 NDST2P52849 883 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 TPI1P60174 286 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 DPYSL3Q14195 570 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 MESDQ14696 234 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 PDK2Q15119 407 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 HADHQ16836 314 aaKnown RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 RNF219Q5W0B1 726 aaPredicted RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 CCDC117Q8IWD4 279 aaPredicted RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 ARHGAP12Q8IWW6 846 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 TXLNBQ8N3L3 684 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 ZWILCHQ9H900 591 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 POLR3BQ9NW08 1133 aaPredicted RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 CACNA2D2Q9NY47 1150 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 VPS51Q9UID3 782 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 ALG6Q9Y672 507 aa13.76□□□□□ -0.21
CDH1-204ENST00000562118 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
CDH1-204ENST00000562118 CREB3O43889 395 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 APBB3O95704 486 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 CD48P09326 243 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 HOXB2P14652 356 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 ERCC2P18074 760 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 COMTP21964 271 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 CLCN6P51797 869 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 COPAP53621 1224 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 ARF5P84085 180 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
CDH1-204ENST00000562118 PARP15Q460N3 678 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 ATP13A4Q4VNC1 1196 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 KIAA1211LQ6NV74 962 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 RWDD4Q6NW29 188 aaKnown RBP13.75□□□□□ -0.21
CDH1-204ENST00000562118 METTL3Q86U44 580 aaKnown RBP13.75□□□□□ -0.21
CDH1-204ENST00000562118 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 CHPFQ8IZ52 775 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 RNF10Q8N5U6 811 aaKnown RBP13.75□□□□□ -0.21
CDH1-204ENST00000562118 NPWQ8N729 165 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 CYB5D2Q8WUJ1 264 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 C2orf49Q9BVC5 232 aaPredicted RBP13.75□□□□□ -0.21
CDH1-204ENST00000562118 CIPCQ9C0C6 399 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 KCNF1Q9H3M0 494 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 FBRSQ9HAH7 460 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 ZDHHC4Q9NPG8 344 aa13.75□□□□□ -0.21
CDH1-204ENST00000562118 TARSL2A2RTX5 802 aaKnown RBP13.74□□□□□ -0.21
CDH1-204ENST00000562118 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 C10orf142B7Z368 130 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 H3BRJ5 948 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 RAMP2O60895 175 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 ZNF821O75541 412 aaPredicted RBP13.74□□□□□ -0.21
CDH1-204ENST00000562118 PTPN5P54829 565 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 NRLP54845 237 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 SERINC3Q13530 473 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 RHOT1Q8IXI2 618 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 LZTR1Q8N653 840 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 OR7D4Q8NG98 312 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 HSPH1Q92598 858 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms