RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	VCP	P55072	806 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	STARD6	P59095	220 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RPS24	P62847	133 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SULT2A1	Q06520	285 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DPYS	Q14117	519 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DPYSL3	Q14195	570 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RPS6KA1	Q15418	735 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TAZ	Q16635	292 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PARP15	Q460N3	678 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TFDP3	Q5H9I0	405 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LCE2C	Q5TA81	110 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FAM72A	Q5TYM5	149 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DAB2IP	Q5VWQ8	1189 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TXNRD3NB	Q6F5E7	133 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GRAMD4	Q6IC98	578 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FAM72D	Q6L9T8	149 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	BZW1	Q7L1Q6	419 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ANKS1B	Q7Z6G8	1248 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	C14orf80	Q86SX3	495 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	NLRP14	Q86W24	1093 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FAM72B	Q86X60	149 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	AHI1	Q8N157	1196 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	UMODL1-AS1	Q8N2C9	162 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SYNPO	Q8N3V7	929 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ATRIP	Q8WXE1	791 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	EDA	Q92838	391 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	IGSF8	Q969P0	613 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CSPG4P5	Q96PW8	444 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KCTD15	Q96SI1	283 aa	Predicted RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	P2RY13	Q9BPV8	354 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	IER2	Q9BTL4	223 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	C1QTNF2	Q9BXJ5	285 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MAK16	Q9BXY0	300 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MAGEH1	Q9H213	219 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CARD9	Q9H257	536 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMPRSS4	Q9NRS4	437 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	HEBP1	Q9NRV9	189 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DNAJC17	Q9NVM6	304 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TRMT1	Q9NXH9	659 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CWC15	Q9P013	229 aa	Known RBP	10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MUTYH	Q9UIF7	546 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	NEU3	Q9UQ49	428 aa		10.17	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KIF2A	O00139	706 aa	Predicted RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CES2	O00748	559 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RAMP2	O60895	175 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FTCD	O95954	541 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ASL	P04424	464 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ATP5B	P06576	529 aa	Known RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TIMP2	P16035	220 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GOT1	P17174	413 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	OPRD1	P41143	372 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MAGEA9	P43362	315 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GEMIN4	P57678	1058 aa	Known RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CA9	Q16790	459 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GAB4	Q2WGN9	574 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	HSF5	Q4G112	596 aa	Predicted RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ANKRD20A8P	Q5CZ79	823 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMEM196	Q5HYL7	178 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DGKK	Q5KSL6	1271 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZNF569	Q5MCW4	686 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ARTN	Q5T4W7	220 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMCO4	Q5TGY1	634 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMCO3	Q6UWJ1	677 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TPRG1	Q6ZUI0	275 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CFAP52	Q8N1V2	620 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PYROXD2	Q8N2H3	581 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CARNMT1	Q8N4J0	409 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TERB1	Q8NA31	727 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KDM1B	Q8NB78	822 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	UCMA	Q8WVF2	138 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FAM3C	Q92520	227 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ACD	Q96AP0	544 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RNF157	Q96PX1	679 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GOLPH3	Q9H4A6	298 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CD320	Q9NPF0	282 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ARHGEF4	Q9NR80	690 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GPATCH2L	Q9NWQ4	482 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZNF212	Q9UDV6	495 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	HPCAL4	Q9UM19	191 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	STARD13	Q9Y3M8	1113 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	HYOU1	Q9Y4L1	999 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	COL4A2	P08572	1712 aa		10.16	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KANSL1L	A0AUZ9	987 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	C3orf70	A6NLC5	250 aa	Predicted RBP	10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DCLK1	O15075	740 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CNTN5	O94779	1100 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TJP3	O95049	919 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KAT7	O95251	611 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RHOC	P08134	193 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CISD3	P0C7P0	127 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PABPC1	P11940	636 aa	Known RBP	10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PRLR	P16471	622 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ERCC2	P18074	760 aa		10.15	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MX2	P20592	715 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms