RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 VPS28Q9UK41 221 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 DAAM1Q9Y4D1 1078 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 PAXBP1Q9Y5B6 917 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 GJB3O75712 270 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 RNASEH2AO75792 299 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 GJB6O95452 261 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 F9P00740 461 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 RHOCP08134 193 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 MMP8P22894 467 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 NNMTP40261 264 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 CDH4P55283 916 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 OXCT1P55809 520 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 ATP11AP98196 1134 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 BNC1Q01954 994 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 ELAVL3Q14576 367 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 CDO1Q16878 200 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 ANO6Q4KMQ2 910 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 RAB6CQ53S08 254 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 LAYNQ6UX15 382 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 TRIM72Q6ZMU5 477 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 TFAP2DQ7Z6R9 452 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 PIP4P1Q86T03 277 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 AADATQ8N5Z0 425 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 ERGIC2Q96RQ1 377 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 FAM129BQ96TA1 746 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 RAB6CQ9H0N0 254 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 MUC3BQ9H195 1237 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 MPP6Q9NZW5 540 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 ANGPTL2Q9UKU9 493 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 SCML1Q9UN30 329 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 NCKAP1Q9Y2A7 1128 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 OR51B4Q9Y5P0 310 aa17.68■□□□□ 0.42
CDC42BPB-208ENST00000561271 GOLGA4Q13439 2230 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 ARID1BQ8NFD5 2236 aaPredicted RBP17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 SPAARA0A1B0GVQ0 90 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 A0A1B0GVT2 93 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 CD59P13987 128 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 SLC8A1P32418 973 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 METAP1P53582 386 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 FOXC1Q12948 553 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 C15orf59Q2T9L4 293 aaPredicted RBP17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 Q6ZVU0 165 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 JOSD2Q8TAC2 188 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 FRS2Q8WU20 508 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 OMDQ99983 421 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 SLC32A1Q9H598 525 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 IL21RQ9HBE5 538 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 TBC1D30Q9Y2I9 924 aa17.67■□□□□ 0.42
CDC42BPB-208ENST00000561271 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 E9PAM4 449 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 PLK4O00444 970 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 SNAP91O60641 907 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 ADH1BP00325 375 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 IL1BP01584 269 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 IGHV4-34P06331 123 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 UNGP13051 313 aaPredicted RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 NSFP46459 744 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 CSNK1EP49674 416 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 ACCSLQ4AC99 568 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 KIAA0895LQ68EN5 471 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 CAVIN1Q6NZI2 390 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 NCEH1Q6PIU2 408 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 LRRC31Q6UY01 552 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 ARCQ7LC44 396 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 PPP1R9BQ96SB3 815 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 PSMB7Q99436 277 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 ORAI3Q9BRQ5 295 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 ZDHHC5Q9C0B5 715 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 TM9SF3Q9HD45 589 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 SEPT11Q9NVA2 429 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 FZD4Q9ULV1 537 aa17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 FNDC3AQ9Y2H6 1198 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-208ENST00000561271 SPEGQ15772 3267 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 MYLKQ15746 1914 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 IGLV3-10A0A075B6K4 115 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 ATP9BO43861 1147 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 BNIP3LO60238 219 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 SRGAP2O75044 1071 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 CER1O95813 267 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 C5AR1P21730 350 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 CD27P26842 260 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 SDC4P31431 198 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 AFF3P51826 1226 aaKnown RBP17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 GALCP54803 685 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 ADPRHP54922 357 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 FAM193AP78312 1265 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 SHC2P98077 582 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 CLEC16AQ2KHT3 1053 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 POM121L1PQ3SYA9 428 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 ARTNQ5T4W7 220 aa17.65■□□□□ 0.42
CDC42BPB-208ENST00000561271 SH2D3CQ8N5H7 860 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms