RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OMDQ99983 421 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 HINFPQ9BQA5 517 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 ZNF670Q9BS34 389 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CINPQ9BW66 212 aaPredicted RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 TRIM7Q9C029 511 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 TMPRSS4Q9NRS4 437 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CACNA2D2Q9NY47 1150 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 THAP10Q9P2Z0 257 aaPredicted RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 CHD9Q3L8U1 2897 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 MYH10P35580 1976 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 IGLV3-10A0A075B6K4 115 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 RASA4BC9J798 803 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 PRRT4C9JH25 899 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 PPP1R12AO14974 1030 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 PJA2O43164 708 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 RASA4O43374 803 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 BUB1BO60566 1050 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 PALMO75781 387 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 FECHP22830 423 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 MZF1P28698 734 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 OXTRP30559 389 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 SGSHP51688 502 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 ZNF235Q14590 738 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 RPS6KA1Q15418 735 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 ELF2Q15723 593 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 CRY1Q16526 586 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 DPYSL2Q16555 572 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 C5orf22Q49AR2 442 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 ALFQ53S48 1182 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 KAZNQ674X7 775 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 ZNF776Q68DI1 518 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 ANO7Q6IWH7 933 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 SLC36A4Q6YBV0 504 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 BNIPLQ7Z465 357 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 NDUFAF2Q8N183 169 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 P3H4Q92791 437 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 TTC17Q96AE7 1141 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 RPL10LQ96L21 214 aaKnown RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 HHIPQ96QV1 700 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 KCTD15Q96SI1 283 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 PCDH18Q9HCL0 1135 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 ZSCAN32Q9NX65 697 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 CALCOCO1Q9P1Z2 691 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 UBA2Q9UBT2 640 aaPredicted RBP10.96□□□□□ -0.65
TPM1-229ENST00000561242 SCML1Q9UN30 329 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
TPM1-229ENST00000561242 WASH4PA8MWX3 477 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 TRIM24O15164 1050 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 KDELR3O43731 214 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 TJP3O95049 919 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 IGSF6O95976 241 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 IL1BP01584 269 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 PRNPP04156 253 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 CA4P22748 312 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 AMPD1P23109 780 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 KDELR1P24390 212 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 HOXC13P31276 330 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 ACTN2P35609 894 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 KIR2DL1P43626 348 aaPredicted RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 COPS2P61201 443 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 RHOAP61586 193 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 SATB1Q01826 763 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 RFTN1Q14699 578 aaPredicted RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 GRM3Q14832 879 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 PDK1Q15118 436 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 DLG2Q15700 870 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 FUT11Q495W5 492 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 ANKRD20A8PQ5CZ79 823 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 FSCBQ5H9T9 825 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 CCDC70Q6NSX1 233 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 PRR23BQ6ZRT6 265 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 Q6ZS52 159 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 APCDD1Q8J025 514 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 OR7D4Q8NG98 312 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 OR2T3Q8NH03 318 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 MAIP1Q8WWC4 291 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 SORCS1Q8WY21 1168 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 ARHGEF2Q92974 986 aaKnown RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 CELF6Q96J87 481 aaKnown RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 CSPG4P5Q96PW8 444 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 CEP44Q9C0F1 390 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 CWC15Q9P013 229 aaKnown RBP10.95□□□□□ -0.66
TPM1-229ENST00000561242 PCDHGA2Q9Y5H1 932 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 HEY1Q9Y5J3 304 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 RAD54BQ9Y620 910 aa10.95□□□□□ -0.66
TPM1-229ENST00000561242 C2orf16Q68DN1 1984 aa10.94□□□□□ -0.66
TPM1-229ENST00000561242 ATG2AQ2TAZ0 1938 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms