RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RNF219Q5W0B1 726 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 AFMIDQ63HM1 303 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 RWDD4Q6NW29 188 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 RFX8Q6ZV50 586 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 KIAA1328Q86T90 577 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 CPNE8Q86YQ8 564 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 RNF10Q8N5U6 811 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 LZTR1Q8N653 840 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 ALLCQ8N6M5 410 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 DCAF4L2Q8NA75 395 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 FAF2Q96CS3 445 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 ACOX2Q99424 681 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 PSMB7Q99436 277 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 KLC2Q9H0B6 622 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 NOL6Q9H6R4 1146 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 ZWILCHQ9H900 591 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 PCDH18Q9HCL0 1135 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 NDFIP2Q9NV92 336 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 SPATA6Q9NWH7 488 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 C2orf42Q9NWW7 574 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 EBF1Q9UH73 591 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 PLA2G4CQ9UP65 541 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 HS3ST2Q9Y278 367 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 ARIH1Q9Y4X5 557 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 STON1Q9Y6Q2 735 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 ABCA7Q8IZY2 2146 aa9.88□□□□□ -0.83
RABGGTA-221ENST00000561055 A0A0D9SEW6 157 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 H3BRJ5 948 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 EEF2KO00418 725 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 DCLK1O15075 740 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ZMPSTE24O75844 475 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 KLF8O95600 359 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ERCC2P18074 760 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 COMTP21964 271 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 KDELR1P24390 212 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 IL12RB1P42701 662 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 SATB1Q01826 763 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 SLC20A2Q08357 652 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 CAMK2GQ13555 558 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 DPYSL3Q14195 570 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 SMTNL2Q2TAL5 461 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ATP13A4Q4VNC1 1196 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 SDE2Q6IQ49 451 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 TFAP2DQ7Z6R9 452 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 RASSF3Q86WH2 238 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 MAP7D3Q8IWC1 876 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 RHOT1Q8IXI2 618 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 CHPFQ8IZ52 775 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 CCDC33Q8N5R6 958 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 LRRC57Q8N9N7 239 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 TXNDC5Q8NBS9 432 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 KIAA1524Q8TCG1 905 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 HSPH1Q92598 858 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ARHGEF2Q92974 986 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ZNF670Q9BS34 389 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 DESI2Q9BSY9 194 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 C2orf49Q9BVC5 232 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 TSGA10Q9BZW7 698 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 CIPCQ9C0C6 399 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 LRRC19Q9H756 370 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 DDX56Q9NY93 547 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 SUN2Q9UH99 717 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 VPS28Q9UK41 221 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 ERVW-1Q9UQF0 538 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 DOCK9Q9BZ29 2069 aa9.87□□□□□ -0.83
RABGGTA-221ENST00000561055 A0A1W2PQF6 199 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 C3orf70A6NLC5 250 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 TMEM110-MUSTN1A8MSY1 372 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 WASH3PC4AMC7 463 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 PSTPIP1O43586 416 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 KDELR3O43731 214 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 KRT86O43790 486 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 ATP9BO43861 1147 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 RAMP2O60895 175 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 CCDC175P0C221 793 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 SP9P0CG40 484 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 NRLP54845 237 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 CDH6P55285 790 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 POLD3Q15054 466 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 ANGPT1Q15389 498 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 TAZQ16635 292 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 PARP15Q460N3 678 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 DAAM2Q86T65 1068 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 SH2D3CQ8N5H7 860 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 OR7D4Q8NG98 312 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 CYB5D2Q8WUJ1 264 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 SORCS1Q8WY21 1168 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 CSPG4P5Q96PW8 444 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 MUC3BQ9H195 1237 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 DNAI1Q9UI46 699 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 VPS51Q9UID3 782 aa9.86□□□□□ -0.83
RABGGTA-221ENST00000561055 SLC8A2Q9UPR5 921 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms