RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HERC6Q8IVU3 1022 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 VPS50Q96JG6 964 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 CNDP1Q96KN2 507 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 VPS28Q9UK41 221 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 A0A1W2PPW3 197 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 HTRA2O43464 458 aaPredicted RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 FUCA1P04066 466 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CAPNS1P04632 268 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 GNAO1P09471 354 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 HMOX2P30519 316 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 GP5P40197 560 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 C16orf87Q6PH81 154 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 DQX1Q8TE96 717 aaKnown RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 ZDHHC2Q9UIJ5 367 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 SCN9AQ15858 1988 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 TRIM38O00635 465 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 RGS20O76081 388 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 MCF2P10911 925 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CCDC130P13994 396 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CD247P20963 164 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CCND2P30279 289 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 GPD2P43304 727 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 GLRBP48167 497 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 RPL14P50914 215 aaKnown RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 AP3M2P53677 418 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 ATXN1P54253 815 aaKnown RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 C21orf59P57076 290 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CAPSQ13938 189 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 DPYSQ14117 519 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 PDCD4Q53EL6 469 aaKnown RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 DCAF6Q58WW2 860 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 ARL13AQ5H913 290 aaPredicted RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 ZNF667Q5HYK9 610 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 GPR107Q5VW38 600 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 ZBTB49Q6ZSB9 765 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 STRA8Q7Z7C7 330 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 AGAP2Q99490 1192 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 APBA2Q99767 749 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 RMI1Q9H9A7 625 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 SEPT10Q9P0V9 454 aa16.81■□□□□ 0.28
TPM1-228ENST00000560975 CNOT11Q9UKZ1 510 aaKnown RBP16.81■□□□□ 0.28
TPM1-228ENST00000560975 J3QRK9 145 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 K7EPI3 171 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TK2O00142 265 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TIPRLO75663 272 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 PGAM1P18669 254 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TFEBP19484 476 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
TPM1-228ENST00000560975 EPHX2P34913 555 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 PSME3P61289 254 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 SEMA5AQ13591 1074 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 FAM110BQ8TC76 370 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 SREK1Q8WXA9 508 aaKnown RBP16.8■□□□□ 0.28
TPM1-228ENST00000560975 FBXL8Q96CD0 374 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 LGMNQ99538 433 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
TPM1-228ENST00000560975 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 CDYLQ9Y232 598 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 FIS1Q9Y3D6 152 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
TPM1-228ENST00000560975 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 SAC3D1A6NKF1 404 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 C9IYK1 514 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 E7ENX8 843 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 GRID2O43424 1007 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 ADAM23O75077 832 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TNNC2P02585 160 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 ARSAP15289 507 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 HDCP19113 662 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 HOXD12P35452 270 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 GRIA4P48058 902 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 BOLA3Q53S33 107 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 FSTL4Q6MZW2 842 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 ABHD15Q6UXT9 468 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 CENPSQ8N2Z9 138 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 COLGALT1Q8NBJ5 622 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 DDHD1Q8NEL9 900 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 ACVR1CQ8NER5 493 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 LPGAT1Q92604 370 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 NMRAL1Q9HBL8 299 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
TPM1-228ENST00000560975 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
TPM1-228ENST00000560975 TCAF2A6NFQ2 919 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TMEM114B3SHH9 223 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 TMEM233B4DJY2 109 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 SOCS2O14508 198 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 BMP10O95393 424 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 HOXC6P09630 235 aa16.79■□□□□ 0.28
TPM1-228ENST00000560975 ARL2P36404 184 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms