RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 BRI3BPQ8WY22 251 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 NLRP4Q96MN2 994 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 MAK16Q9BXY0 300 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SLITRK6Q9H5Y7 841 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 USP29Q9HBJ7 922 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ATAD3AQ9NVI7 634 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CACNA2D2Q9NY47 1150 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 NAGPAQ9UK23 515 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 DDX60Q8IY21 1712 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 RIC1Q4ADV7 1423 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 LRP5O75197 1615 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A1W2PQ09 198 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 SH3PXD2BA1X283 911 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TTI1O43156 1089 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 HNRNPCL1O60812 293 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TBCAO75347 108 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 OR6B1O95007 311 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 APBB3O95704 486 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 IFNB1P01574 187 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PRKCIP41743 596 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 VPS41P49754 854 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TMED10P49755 219 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 KCNMA1Q12791 1236 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 COX10Q12887 443 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MBNL2Q5VZF2 373 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PSAPL1Q6NUJ1 521 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TAF2Q6P1X5 1199 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 RFWD3Q6PCD5 774 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 RHOT1Q8IXI2 618 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 CPT1CQ8TCG5 803 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PLEKHO2Q8TD55 490 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 CCT7Q99832 543 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ECSITQ9BQ95 431 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 NACAP1Q9BZK3 213 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 GBA3Q9H227 469 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 CUEDC2Q9H467 287 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 GREM2Q9H772 168 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TRPC7Q9HCX4 862 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 CCPG1Q9ULG6 757 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 CHKBQ9Y259 395 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 UTP11Q9Y3A2 253 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 GPC6Q9Y625 555 aaPredicted RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MYH2Q9UKX2 1941 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 hCG_1809904A0A1W2PP81 198 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A1W2PPE2 198 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A1W2PR64 198 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 RGSL1A5PLK6 1076 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TMEM233B4DJY2 109 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 STX16-NPEPL1H3BU86 382 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 STX16O14662 325 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MAPK13O15264 365 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ADAM20O43506 726 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 OPHN1O60890 802 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 SNX4O95219 450 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 DLGAP3O95886 979 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 GHRHP01286 108 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 AMY2AP04746 511 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 AMY2BP19961 511 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ENDOUP21128 410 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 RAC1P63000 192 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ASTE1Q2TB18 679 aaPredicted RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 FAM69AQ5T7M9 428 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ATG16L1Q676U5 607 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MFSD5Q6N075 450 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 BORAQ6PGQ7 559 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 KDELC1Q6UW63 502 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TMTC3Q6ZXV5 915 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 OTUD6AQ7L8S5 288 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MB21D2Q8IYB1 491 aaPredicted RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 SCML4Q8N228 414 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF606Q8WXB4 792 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 SHC3Q92529 594 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 FBXW5Q969U6 566 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 EPSTI1Q96J88 318 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 ERGIC2Q96RQ1 377 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 DDX18Q9NVP1 670 aaKnown RBP6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PRELID1Q9Y255 219 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 PCDHB6Q9Y5E3 794 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 AP1M2Q9Y6Q5 423 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 WDR19Q8NEZ3 1342 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 MYH10P35580 1976 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 C4AP0C0L4 1744 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 C4BP0C0L5 1744 aa6.91□□□□□ -1.3
TSPAN3-209ENST00000560715 C2orf81A6NN90 581 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SPECC1L-ADORA2AF8WAN1 911 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 TXNL1O43396 289 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 DCTN3O75935 186 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 HSPA8P11142 646 aaKnown RBP6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 P4HA1P13674 534 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 CRABP2P29373 138 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 PRCPP42785 496 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 MTHFRP42898 656 aa6.9□□□□□ -1.3
TSPAN3-209ENST00000560715 SLC1A4P43007 532 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms