RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MFHAS1Q9Y4C4 1052 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SHROOM3Q8TF72 1996 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 HMX2A2RU54 273 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 TNFRSF10BO14763 440 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SYN3O14994 580 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 MGEA5O60502 916 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 LRIG2O94898 1065 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 OAZ2O95190 189 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 LMNAP02545 664 aaKnown RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 ITGA2BP08514 1039 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 MYL4P12829 197 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 EZRP15311 586 aaKnown RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 BGNP21810 368 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 BDNFP23560 247 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 HOXD10P28358 340 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 EPHB2P29323 1055 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 CCR1P32246 355 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 HK2P52789 917 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 LIMK2P53671 638 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 GEMP55040 296 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 TMPRSS15P98073 1019 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 YWHAHQ04917 246 aaPredicted RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 DSC1Q08554 894 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SMARCB1Q12824 385 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 CDH17Q12864 832 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 UGP2Q16851 508 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 WASHC2DQ5SRD0 308 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 WLSQ5T9L3 541 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SLC24A5Q71RS6 500 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 CLNKQ7Z7G1 428 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SPATA2LQ8IUW3 424 aaPredicted RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 GABPB2Q8TAK5 448 aaPredicted RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 PTPRN2Q92932 1015 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 TBC1D31Q96DN5 1066 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 C8orf48Q96LL4 319 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 FCRL5Q96RD9 977 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 IL12RB2Q99665 862 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 RBBP8Q99708 897 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 CFHR5Q9BXR6 569 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.82
RTF1-206ENST00000560447 MMADHCQ9H3L0 296 aaPredicted RBP9.92□□□□□ -0.82
RTF1-206ENST00000560447 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SYBUQ9NX95 663 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SEPT10Q9P0V9 454 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 RPS6KL1Q9Y6S9 549 aa9.92□□□□□ -0.82
RTF1-206ENST00000560447 SYNJ2BP-COX16A0A087WUM0 186 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ARHGAP42A6NI28 874 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 FAM72CH0Y354 149 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 MATN3O15232 486 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 PLIN3O60664 434 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 SNUPNO95149 360 aaKnown RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 GNRH1P01148 92 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 COL6A2P12110 1019 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 CALB2P22676 271 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 GRIA1P42261 906 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 CACNA2D1P54289 1103 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 SESN2P58004 480 aaPredicted RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 BST1Q10588 318 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 STX3Q13277 289 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ANO4Q32M45 955 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 PREPLQ4J6C6 727 aaPredicted RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 MAP3K21Q5TCX8 1036 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 MROH9Q5TGP6 573 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 FAM72AQ5TYM5 149 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 AFMIDQ63HM1 303 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 PDPK2PQ6A1A2 396 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 FAM72DQ6L9T8 149 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 CDHR3Q6ZTQ4 885 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 MON1AQ86VX9 555 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 RASSF3Q86WH2 238 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 FAM72BQ86X60 149 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 WDR75Q8IWA0 830 aaKnown RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 ARHGAP24Q8N264 748 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ARMC2Q8NEN0 867 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 RDH11Q8TC12 318 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 RNF34Q969K3 372 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 NSL1Q96IY1 281 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 CEP295NLQ96MC4 621 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 KIFC1Q9BW19 673 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 TMEM120AQ9BXJ8 343 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ZCWPW1Q9H0M4 648 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ELAC1Q9H777 363 aaKnown RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 KCNK13Q9HB14 408 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 OLA1Q9NTK5 396 aaKnown RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 PCMTD2Q9NV79 361 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 TBC1D13Q9NVG8 400 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 COX16Q9P0S2 106 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 SCML2Q9UQR0 700 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms