RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 DUX3Q96PT4 197 aa3□□□□□ -1.93
SPG11-222ENST00000560435 PAAF1Q9BRP4 392 aa3□□□□□ -1.93
SPG11-222ENST00000560435 BTBD1Q9H0C5 482 aa3□□□□□ -1.93
SPG11-222ENST00000560435 OSBPL5Q9H0X9 879 aaPredicted RBP3□□□□□ -1.93
SPG11-222ENST00000560435 AGO1Q9UL18 857 aaKnown RBP3□□□□□ -1.93
SPG11-222ENST00000560435 IGHV4-28A0A0C4DH34 117 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 C3orf70A6NLC5 250 aaPredicted RBP2.99□□□□□ -1.93
SPG11-222ENST00000560435 DHHO43323 396 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 SERPINI2O75830 405 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 VIPP01282 170 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 ALDOAP04075 364 aaKnown RBP2.99□□□□□ -1.93
SPG11-222ENST00000560435 PEX2P28328 305 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 PPP3CCP48454 512 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 NOVP48745 357 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 SLC5A9Q2M3M2 681 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 RETSATQ6NUM9 610 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 MSANTD2Q6P1R3 559 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 TMEM88Q6PEY1 159 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 LRRC57Q8N9N7 239 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 CMASQ8NFW8 434 aaPredicted RBP2.99□□□□□ -1.93
SPG11-222ENST00000560435 SLC25A33Q9BSK2 321 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 UNKQ9C0B0 810 aaKnown RBP2.99□□□□□ -1.93
SPG11-222ENST00000560435 MMP28Q9H239 520 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 FBXO4Q9UKT5 387 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 SRPRBQ9Y5M8 271 aaKnown RBP2.99□□□□□ -1.93
SPG11-222ENST00000560435 NOTCH2Q04721 2471 aa2.99□□□□□ -1.93
SPG11-222ENST00000560435 IGLV5-37A0A075B6J1 123 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 PRAC2D3DTV9 90 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 MCIDASD6RGH6 385 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 TULP2O00295 520 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 NKX2-8O15522 239 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 EDIL3O43854 480 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 XPNPEP2O43895 674 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 HRGP04196 525 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 MYZAPP0CAP1 466 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 KRT5P13647 590 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 THPOP40225 353 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ATP12AP54707 1039 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ADPRHP54922 357 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 HDAC1Q13547 482 aaPredicted RBP2.98□□□□□ -1.93
SPG11-222ENST00000560435 C14orf177Q52M58 125 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ARL13AQ5H913 290 aaPredicted RBP2.98□□□□□ -1.93
SPG11-222ENST00000560435 RAP1GAP2Q684P5 730 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 HEPHL1Q6MZM0 1159 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 CCDC149Q6ZUS6 474 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 KLBQ86Z14 1044 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 FAM156AQ8NDB6 213 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 TMEM163Q8TC26 289 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 SLC35F5Q8WV83 523 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 LRRC46Q96FV0 321 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 BICD1Q96G01 975 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ZNF333Q96JL9 665 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 MAGEB5Q9BZ81 275 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ACTR5Q9H9F9 607 aaPredicted RBP2.98□□□□□ -1.93
SPG11-222ENST00000560435 TMEM248Q9NWD8 314 aa2.98□□□□□ -1.93
SPG11-222ENST00000560435 ZMYND8Q9ULU4 1186 aaPredicted RBP2.98□□□□□ -1.93
SPG11-222ENST00000560435 MAGEA13PA6NCF6 341 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 BAG4O95429 457 aaKnown RBP2.97□□□□□ -1.93
SPG11-222ENST00000560435 MYL4P12829 197 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 C21orf33P30042 268 aaPredicted RBP2.97□□□□□ -1.93
SPG11-222ENST00000560435 TMPRSS3P57727 454 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 TAS2R50P59544 299 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 FAM193AP78312 1265 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 TLE3Q04726 772 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 DAG1Q14118 895 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 CSHL1Q14406 222 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 KIAA0753Q2KHM9 967 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 MINDY4Q4G0A6 757 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 KLHDC8BQ8IXV7 354 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 SLC22A17Q8WUG5 538 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 SCMH1Q96GD3 660 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 PCDHAC1Q9H158 963 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 SCRT2Q9NQ03 307 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 PRDM11Q9NQV5 511 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 SMAD5-AS1Q9Y6J3 95 aa2.97□□□□□ -1.93
SPG11-222ENST00000560435 ZBED1O96006 694 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 ITGA5P08648 1049 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 ZNF883P0CG24 379 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 UNGP13051 313 aaPredicted RBP2.96□□□□□ -1.94
SPG11-222ENST00000560435 IDEP14735 1019 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 AZU1P20160 251 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 DGKAP23743 735 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 RHAGQ02094 409 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 RBBP5Q15291 538 aaKnown RBP2.96□□□□□ -1.94
SPG11-222ENST00000560435 AAK1Q2M2I8 961 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 ARHGAP15Q53QZ3 475 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 MARK2Q7KZI7 788 aaKnown RBP2.96□□□□□ -1.94
SPG11-222ENST00000560435 PALB2Q86YC2 1186 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 HORMAD2Q8N7B1 307 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 IL17RCQ8NAC3 791 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 MIGA1Q8NAN2 632 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 CCDC150Q8NCX0 1101 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 FBXO17Q96EF6 278 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 FRMD8Q9BZ67 464 aaPredicted RBP2.96□□□□□ -1.94
SPG11-222ENST00000560435 PNPLA8Q9NP80 782 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 ZDHHC7Q9NXF8 308 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 ZIM2Q9NZV7 527 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 MALT1Q9UDY8 824 aa2.96□□□□□ -1.94
SPG11-222ENST00000560435 RAP2CQ9Y3L5 183 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms