RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ASGR1P07306 291 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 FGF3P11487 239 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 NFKB1P19838 968 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 SERPINB3P29508 390 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CCR1P32246 355 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CD68P34810 354 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 THPOP40225 353 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 BRCC3P46736 316 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 AFF1P51825 1210 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CCNG1P51959 295 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 PRKAA2P54646 552 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 GEMP55040 296 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 PDE1BQ01064 536 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CACNB2Q08289 660 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ILF2Q12905 390 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 PDE1CQ14123 709 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ACBD5Q5T8D3 534 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 TEDDM1Q5T9Z0 273 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 N4BP2L1Q5TBK1 243 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 MBLAC2Q68D91 279 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 PDPK2PQ6A1A2 396 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 LONP2Q86WA8 852 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 SPATA2LQ8IUW3 424 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 WDR75Q8IWA0 830 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 DCP1BQ8IZD4 617 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ARHGAP18Q8N392 663 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 DNAAF3Q8N9W5 541 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 PPP1R14CQ8TAE6 165 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 RDH11Q8TC12 318 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ADAM32Q8TC27 787 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 AGAP11Q8TF27 550 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 STON2Q8WXE9 905 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 EDEM1Q92611 657 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 FUBP3Q96I24 572 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 FCRL5Q96RD9 977 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 IL12RB2Q99665 862 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ADAM2Q99965 735 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 BTBD10Q9BSF8 475 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 MLPHQ9BV36 600 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 KIFC1Q9BW19 673 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 MRM3Q9HC36 420 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ARL8BQ9NVJ2 186 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CACNG4Q9UBN1 327 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 NEU3Q9UQ49 428 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ANKRD6Q9Y2G4 727 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 STK38LQ9Y2H1 464 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 AAR2Q9Y312 384 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 HBS1LQ9Y450 684 aaKnown RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 NR2E3Q9Y5X4 410 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 CHD5Q8TDI0 1954 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 TMEM114B3SHH9 223 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 HGSO14964 777 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 MATN3O15232 486 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 CBX6O95503 412 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 GSRP00390 522 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 POMCP01189 267 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 AMHP03971 560 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 SLC2A3P11169 496 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 COL6A1P12109 1028 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 COL6A2P12110 1019 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ALOX15P16050 662 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 TYK2P29597 1187 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 MAGEA11P43364 429 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 HARS2P49590 506 aaKnown RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 FLT3LGP49771 235 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 HK2P52789 917 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 CRADDP78560 199 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 DSC1Q08554 894 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ZBTB17Q13105 803 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 MPP3Q13368 585 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 PCLAFQ15004 111 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 KCNA10Q16322 511 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 NFE2Q16621 373 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 UGP2Q16851 508 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ANO4Q32M45 955 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 FASTKD1Q53R41 847 aaKnown RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 PCID2Q5JVF3 399 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 AFMIDQ63HM1 303 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 POTEHQ6S545 545 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 CLEC14AQ86T13 490 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 KCNMB4Q86W47 210 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 CEP57Q86XR8 500 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ARID3BQ8IVW6 561 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ARHGAP12Q8IWW6 846 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 TP53INP2Q8IXH6 220 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 REM2Q8IYK8 340 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 DCLK2Q8N568 766 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ATPAF2Q8N5M1 289 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 ENDOVQ8N8Q3 282 aaKnown RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 FAM13CQ8NE31 585 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 OR10T2Q8NGX3 314 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 OR6Y1Q8NGX8 325 aa8.25□□□□□ -1.09
SMAD3-212ENST00000559937 PIWIL2Q8TC59 973 aaKnown RBP8.25□□□□□ -1.09
SMAD3-212ENST00000559937 URGCPQ8TCY9 931 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms