RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 IRF2BP2Q7Z5L9 587 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 TFAP2DQ7Z6R9 452 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 C3orf20Q8ND61 904 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 OR52K2Q8NGK3 314 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 HAPLN3Q96S86 360 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 PABPC3Q9H361 631 aaKnown RBP12.94□□□□□ -0.34
LRRC28-214ENST00000559433 TBC1D30Q9Y2I9 924 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 DRGXA6NNA5 263 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 GOLGA6L19H0YKK7 550 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ENDOD1O94919 500 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 C7P10643 843 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ENGP17813 658 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 GPD1P21695 349 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 MAOBP27338 520 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 RFC1P35251 1148 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-214ENST00000559433 NR1I3Q14994 352 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ZSCAN23Q3MJ62 389 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ARL13BQ3SXY8 428 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SH3PXD2AQ5TCZ1 1133 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ACAD10Q6JQN1 1059 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 STRADAQ7RTN6 431 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 MMAAQ8IVH4 418 aaKnown RBP12.93□□□□□ -0.34
LRRC28-214ENST00000559433 STK40Q8N2I9 435 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SNX19Q92543 992 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 ALG14Q96F25 216 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 BTBD1Q9H0C5 482 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SLC32A1Q9H598 525 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 FSCN3Q9NQT6 498 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 MPP6Q9NZW5 540 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SCML1Q9UN30 329 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 OR51B4Q9Y5P0 310 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
LRRC28-214ENST00000559433 TP53BP1Q12888 1972 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 SIGLEC16A6NMB1 481 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ARHGAP33O14559 1287 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 MID1O15344 667 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 OPHN1O60890 802 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 KCNK5O95279 499 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 SEMA4FO95754 770 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 VAV1P15498 845 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 OR1E1P30953 314 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ACSL1P33121 698 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 PSMD8P48556 350 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 NOVA1P51513 510 aaKnown RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 KRT83P78385 493 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 FANCCQ00597 558 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CST6Q15828 149 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CACNA1EQ15878 2313 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ACCSLQ4AC99 568 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 C6orf118Q5T5N4 469 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 SETD3Q86TU7 594 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CENPIQ92674 756 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 PTPRN2Q92932 1015 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 MCEEQ96PE7 176 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 OMDQ99983 421 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 SYT11Q9BT88 431 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 C2orf49Q9BVC5 232 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 ZYG11BQ9C0D3 744 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 HAUS4Q9H6D7 363 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 FBXL12Q9NXK8 326 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 TAS2R14Q9NYV8 317 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 NCOR2Q9Y618 2525 aa12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
LRRC28-214ENST00000559433 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 A0A1B0GTW7 788 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 A0A1W2PP55 124 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 TCRBV5S1A1TA0A578 114 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 CDX4O14627 284 aaPredicted RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 TM4SF5O14894 197 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 CCP110O43303 1012 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 ATP9BO43861 1147 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 ADH1BP00325 375 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 IL1BP01584 269 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 RRM1P23921 792 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 SLC8A1P32418 973 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 ADRA1BP35368 520 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 HDAC4P56524 1084 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 UBASH3AP57075 661 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms