RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CCP110O43303 1012 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 RNASEH2AO75792 299 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 FSBPO95073 299 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 SEMA4FO95754 770 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 IL1BP01584 269 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 TPM3P06753 285 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 VAV1P15498 845 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ENGP17813 658 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 RRM1P23921 792 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ACSL1P33121 698 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ADRA1BP35368 520 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 PLK1P53350 603 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 GSCP56915 257 aaPredicted RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 ZBTB16Q05516 673 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 GFPT1Q06210 699 aaPredicted RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 SFSWAPQ12872 951 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 NR1I3Q14994 352 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 CST6Q15828 149 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 EFHC2Q5JST6 749 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 C9orf64Q5T6V5 341 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 DAB2IPQ5VWQ8 1189 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ACAD10Q6JQN1 1059 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 STRADAQ7RTN6 431 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 IRF2BP2Q7Z5L9 587 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ZNF354CQ86Y25 554 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 MCOLN2Q8IZK6 566 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 STK40Q8N2I9 435 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ZCCHC9Q8N567 271 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 CCDC185Q8N715 623 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ATP11CQ8NB49 1132 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 OR7D4Q8NG98 312 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 CPLX3Q8WVH0 158 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ZNF419Q96HQ0 510 aaPredicted RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 C1orf74Q96LT6 269 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 FEM1AQ9BSK4 669 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 ZYG11BQ9C0D3 744 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 RSPH9Q9H1X1 276 aaPredicted RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 PABPC3Q9H361 631 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 ATP13A1Q9HD20 1204 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 FBXL12Q9NXK8 326 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 TAS2R14Q9NYV8 317 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 EVLQ9UI08 416 aaPredicted RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 EIF2B4Q9UI10 523 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 VPS51Q9UID3 782 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 SLC6A14Q9UN76 642 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 PI4KAP42356 2102 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 GON4LQ3T8J9 2241 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 CFAP54Q96N23 3096 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 MED19A0JLT2 244 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 SIGLEC16A6NMB1 481 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 DRGXA6NNA5 263 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SNAP91O60641 907 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ENDOD1O94919 500 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ADH1BP00325 375 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 IGLV3-19P01714 112 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SERPINF2P08697 491 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SKILP12757 684 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 PSMA2P25787 234 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SLC8A1P32418 973 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ZNF143P52747 638 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 LIMK1P53667 647 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 HDAC4P56524 1084 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 RPL7AP62424 266 aaKnown RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 FOXK2Q01167 660 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ELAVL3Q14576 367 aaKnown RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 NUMA1Q14980 2115 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 DLG2Q15700 870 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 C5orf22Q49AR2 442 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 LINGO4Q6UY18 593 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 Q6ZVU0 165 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ZNF571Q7Z3V5 609 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 BNIPLQ7Z465 357 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SLFN11Q7Z7L1 901 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 DSG4Q86SJ6 1040 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SETD3Q86TU7 594 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 VPS36Q86VN1 386 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 DNAAF5Q86Y56 855 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ZNF683Q8IZ20 524 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 HDDC3Q8N4P3 179 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SH2D3CQ8N5H7 860 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 DCAF4L2Q8NA75 395 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 CADM4Q8NFZ8 388 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 OR8D1Q8WZ84 308 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 PTPRN2Q92932 1015 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 ZNF653Q96CK0 615 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 TBC1D31Q96DN5 1066 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 CCDC114Q96M63 670 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 CNPY3Q9BT09 278 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNX1-207ENST00000559401 EDEM3Q9BZQ6 932 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 C6orf106Q9H6K1 298 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 SGK2Q9HBY8 427 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 PARVAQ9NVD7 372 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 AIPL1Q9NZN9 384 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms