RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 DAB2IPQ5VWQ8 1189 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 IL31Q6EBC2 164 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 CXorf57Q6NSI4 855 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 RETSATQ6NUM9 610 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 WDR59Q6PJI9 974 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 ARMCX6Q7L4S7 300 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 ZNF571Q7Z3V5 609 aaPredicted RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 TMC6Q7Z403 805 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 BNIPLQ7Z465 357 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 TFAP2DQ7Z6R9 452 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 ZNF354CQ86Y25 554 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 CACUL1Q86Y37 369 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 MMAAQ8IVH4 418 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 APCDD1Q8J025 514 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 ZNF366Q8N895 744 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 ATP11CQ8NB49 1132 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 RNF214Q8ND24 703 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 JOSD2Q8TAC2 188 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 WFDC5Q8TCV5 224 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 FNIP1Q8TF40 1166 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 OR8D1Q8WZ84 308 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 PIGKQ92643 395 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 CENPIQ92674 756 aaPredicted RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 IGSF8Q969P0 613 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 NTAN1Q96AB6 310 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D31Q96DN5 1066 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 MYEOVQ96EZ4 313 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 TOE1Q96GM8 510 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 ZNF419Q96HQ0 510 aaPredicted RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 RPL10LQ96L21 214 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 HSPA12BQ96MM6 686 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 EIF3CQ99613 913 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 EPAS1Q99814 870 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 OMDQ99983 421 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 SPON2Q9BUD6 331 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 XPO4Q9C0E2 1151 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 TTYH3Q9C0H2 523 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 BTBD1Q9H0C5 482 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 OSBPL2Q9H1P3 480 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 RSPH9Q9H1X1 276 aaPredicted RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 CATSPERBQ9H7T0 1116 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 SGK2Q9HBY8 427 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 CD248Q9HCU0 757 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 PRSS16Q9NQE7 514 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 DYRK4Q9NR20 520 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 WSB2Q9NYS7 404 aaPredicted RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 MPP6Q9NZW5 540 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 USP36Q9P275 1121 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 CNOT8Q9UFF9 292 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 LCMT1Q9UIC8 334 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 TPX2Q9ULW0 747 aaKnown RBP4.49□□□□□ -1.69
SNX1-205ENST00000559339 ERVW-1Q9UQF0 538 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 SDK1Q7Z5N4 2213 aa4.49□□□□□ -1.69
SNX1-205ENST00000559339 A0A0D9SEW6 157 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CXorf51AA0A1B0GTR3 108 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ILVBLA1L0T0 632 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ZSCAN5CA6NGD5 496 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 FAM47DPA6NHR8 397 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 LRRC72A6NJI9 287 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 METTL12A8MUP2 240 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TTC34A8MYJ7 566 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 C1QTNF3-AMACRE9PGA6 284 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MYO1FO00160 1098 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 DDX3XO00571 662 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNX1-205ENST00000559339 MCF2LO15068 1137 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ALOX15BO15296 676 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 FGF10O15520 208 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 DAPK3O43293 454 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CREB3O43889 395 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 AKR1B10O60218 316 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 BNIP3LO60238 219 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PRPSAP2O60256 369 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 RAMP2O60895 175 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SIN3BO75182 1162 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CNTN5O94779 1100 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 LRIG2O94898 1065 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 IGLV3-19P01714 112 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 GYPCP04921 128 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CFIP05156 583 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SYPP08247 313 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SERPINF2P08697 491 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SKILP12757 684 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 C5AR1P21730 350 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ITPKAP23677 461 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CASP14P31944 242 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 L1CAMP32004 1257 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SLC8A1P32418 973 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 HTR7P34969 479 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PBX1P40424 430 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CTSOP43234 321 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 MAPKAPK2P49137 400 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 NUMBP49757 651 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 STK19P49842 368 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 ZNF135P52742 658 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 RPS14P62263 151 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 NRG1Q02297 640 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms