RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GRIA2P42262 883 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 GNA12Q03113 381 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 GALNT2Q10471 571 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 ENPP2Q13822 863 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 CCINQ13939 588 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 TFDP2Q14188 446 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 EIF4HQ15056 248 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 PARP15Q460N3 678 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 FUT11Q495W5 492 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 TMCO3Q6UWJ1 677 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 TP53INP2Q8IXH6 220 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 CARNMT1Q8N4J0 409 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 NAT16Q8N8M0 369 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 TTC8Q8TAM2 541 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 WFIKKN2Q8TEU8 576 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 EDAQ92838 391 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 BHMTQ93088 406 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 MYO19Q96H55 970 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 PBKQ96KB5 322 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 OSBPL9Q96SU4 736 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 NAPGQ99747 312 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 SLC39A8Q9C0K1 460 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 KCNH6Q9H252 994 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 PDFQ9HBH1 243 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 ARHGEF3Q9NR81 526 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 ABCB8Q9NUT2 735 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 DNAJC17Q9NVM6 304 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 DEC1Q9P2X7 70 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 DNAI1Q9UI46 699 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 RASA4BC9J798 803 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 APOC4-APOC2K7ER74 178 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 MAN2B1O00754 1011 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 RASA4O43374 803 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 CST8O60676 142 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 KAT7O95251 611 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 PEX11BO96011 259 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 APOC2P02655 101 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 ZFXP17010 805 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 SERPINB6P35237 376 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 CSKP41240 450 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 TNFRSF4P43489 277 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 KIR2DL1P43626 348 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 NR2C2P49116 596 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 GBE1Q04446 702 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 ZNF33AQ06730 810 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 SERINC3Q13530 473 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 CDH18Q13634 790 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 PITRM1Q5JRX3 1037 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 GRAMD4Q6IC98 578 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 SLC13A5Q86YT5 568 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 LRRC49Q8IUZ0 686 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 SFTPA1Q8IWL2 248 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 APCDD1Q8J025 514 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 AHI1Q8N157 1196 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 DCAF4L2Q8NA75 395 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 KDM1BQ8NB78 822 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 ACTRT1Q8TDG2 376 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 COG1Q8WTW3 980 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 ACDQ96AP0 544 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 MRGPRX3Q96LB0 322 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 TSGA13Q96PP4 275 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 TECTAO75443 2155 aa15.17■□□□□ 0.02
SNRPA1-207ENST00000559309 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 APOL1O14791 398 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 DAPK3O43293 454 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 MAFKO60675 156 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 RAMP2O60895 175 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 RHOCP08134 193 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 HNRNPLP14866 589 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 PECAM1P16284 738 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 TCP1P17987 556 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 DRD1P21728 446 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 ACVRL1P37023 503 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 ETFBP38117 255 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 SIGLEC14Q08ET2 396 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 PTPRNQ16849 979 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 RNF219Q5W0B1 726 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 TPRG1Q6ZUI0 275 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 CREG2Q8IUH2 290 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 OR7D4Q8NG98 312 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 HMCESQ96FZ2 354 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 OSBPL6Q9BZF3 934 aa15.16■□□□□ 0.02
SNRPA1-207ENST00000559309 CTAGE9A4FU28 777 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 NCAM2O15394 837 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 TIMM44O43615 452 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 KDELR3O43731 214 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 CHRNB1P11230 501 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 CXCR5P32302 372 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 PAPOLAP51003 745 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 ARF5P84085 180 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 NOMO1Q15155 1222 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 SYT10Q6XYQ8 523 aa15.15■□□□□ 0.02
SNRPA1-207ENST00000559309 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms