RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 FRS2Q8WU20 508 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 ALG14Q96F25 216 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 HAPLN3Q96S86 360 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 C2orf49Q9BVC5 232 aaPredicted RBP18.25■□□□□ 0.51
TPM1-218ENST00000559281 TMEM59LQ9UK28 342 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 ANKRD6Q9Y2G4 727 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 PCDHGB2Q9Y5G2 931 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 EPG5Q9HCE0 2579 aa18.25■□□□□ 0.51
TPM1-218ENST00000559281 A0A1W2PPC4 97 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 DRGXA6NNA5 263 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 DFNA5O60443 496 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 MBD3O95983 291 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 RHOCP08134 193 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 TFE3P19532 575 aaPredicted RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 GGCXP38435 758 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 C21orf59P57076 290 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 RACK1P63244 317 aaKnown RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 DLG2Q15700 870 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 KIF19Q2TAC6 998 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 C6orf118Q5T5N4 469 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 OTUD1Q5VV17 481 aaPredicted RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 OR14C36Q8NHC7 312 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 SETD7Q8WTS6 366 aaKnown RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 SCNM1Q9BWG6 230 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 ACE2Q9BYF1 805 aaPredicted RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 NLRC4Q9NPP4 1024 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 SERGEFQ9UGK8 458 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 LIMA1Q9UHB6 759 aaKnown RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 NOCTQ9UK39 431 aaKnown RBP18.24■□□□□ 0.51
TPM1-218ENST00000559281 WASF3Q9UPY6 502 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 OR51B4Q9Y5P0 310 aa18.24■□□□□ 0.51
TPM1-218ENST00000559281 CHD8Q9HCK8 2581 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 C1QTNF3-AMACRE9PGA6 284 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 ALOX15BO15296 676 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 CYP1A1P04798 512 aaPredicted RBP18.23■□□□□ 0.51
TPM1-218ENST00000559281 IGHV4-34P06331 123 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 FLT3P36888 993 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 NUMBP49757 651 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 KLK7P49862 253 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 CCR5P51681 352 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 COPB1P53618 953 aaKnown RBP18.23■□□□□ 0.51
TPM1-218ENST00000559281 BNC1Q01954 994 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 C2CD6Q53TS8 623 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 NEK11Q8NG66 645 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 CFAP57Q96MR6 1250 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 CAMK1GQ96NX5 476 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 ADAM33Q9BZ11 813 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 IL21RQ9HBE5 538 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 SNX11Q9Y5W9 270 aa18.23■□□□□ 0.51
TPM1-218ENST00000559281 CACNA1EQ15878 2313 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 CEP192Q8TEP8 1941 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3DA0A087WVF3 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3IA0A087WXS9 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3EA0A087X179 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3KA0A087X1G2 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3FA6NER0 549 aaPredicted RBP18.22■□□□□ 0.51
TPM1-218ENST00000559281 LRRC10BA6NIK2 292 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3LB9A6J9 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 MCF2LO15068 1137 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 VILLO15195 856 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 FLRT2O43155 660 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 SLC7A4O43246 635 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 SRGAP2O75044 1071 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 CNTN5O94779 1100 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 PROS1P07225 676 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3HP0C7X1 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 VAV1P15498 845 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 MMP8P22894 467 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 OR1E1P30953 314 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 IRAK1P51617 712 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 JAM2P57087 298 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 FAM193AP78312 1265 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 UBXN1Q04323 297 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 CCDC15Q0P6D6 951 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 SYCP1Q15431 976 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 ARL13BQ3SXY8 428 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 ALFQ53S48 1182 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3GQ6DHY5 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3CQ6IPX1 549 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.22■□□□□ 0.51
TPM1-218ENST00000559281 TBC1D3Q8IZP1 549 aaPredicted RBP18.22■□□□□ 0.51
TPM1-218ENST00000559281 SH2D3CQ8N5H7 860 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 AADATQ8N5Z0 425 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 ATP11CQ8NB49 1132 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 OR52K2Q8NGK3 314 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 SLC20A1Q8WUM9 679 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 CDC6Q99741 560 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 ANLNQ9NQW6 1124 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 APOBEC2Q9Y235 224 aaKnown RBP18.22■□□□□ 0.51
TPM1-218ENST00000559281 HS3ST2Q9Y278 367 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 FNDC3AQ9Y2H6 1198 aaKnown RBP18.22■□□□□ 0.51
TPM1-218ENST00000559281 SIK3Q9Y2K2 1263 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 NEUROG3Q9Y4Z2 214 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 PCNX2A6NKB5 2137 aa18.22■□□□□ 0.51
TPM1-218ENST00000559281 PCDH15Q96QU1 1955 aa18.21■□□□□ 0.51
TPM1-218ENST00000559281 IGLV3-10A0A075B6K4 115 aa18.21■□□□□ 0.51
TPM1-218ENST00000559281 FAM170AA1A519 330 aa18.21■□□□□ 0.51
TPM1-218ENST00000559281 LGALS16A8MUM7 142 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms