RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 COL20A1Q9P218 1284 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 BARX2Q9UMQ3 279 aaPredicted RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 INPP4BO15327 924 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 JCHAINP01591 159 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ATP6V1B2P21281 511 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ACADSBP45954 432 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 NAGLUP54802 743 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ACTR3P61158 418 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 XIAPP98170 497 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 SLC6A3Q01959 620 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 KLF10Q13118 480 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 GRM1Q13255 1194 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 LPIN1Q14693 890 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 NOMO1Q15155 1222 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 GIPC3Q8TF64 312 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ZNF516Q92618 1163 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DEPDC7Q96QD5 511 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TEX12Q9BXU0 123 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ASPSCR1Q9BZE9 553 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 VTI1BQ9UEU0 232 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 CPSF3Q9UKF6 684 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 PRELID1Q9Y255 219 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 SLCO1B7G3V0H7 640 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 VWA5AO00534 786 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 EFCAB14O75071 495 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 BCL10O95999 233 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TSPAN8P19075 237 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 FASP25445 335 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ARPC4P59998 168 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PSME3P61289 254 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PUDPQ08623 228 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 AGAP9Q5VTM2 703 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TAS2R42Q7RTR8 314 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TRIM74Q86UV6 250 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TRIM73Q86UV7 250 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DSELQ8IZU8 1212 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 MPP5Q8N3R9 675 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 C12orf29Q8N999 325 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 KCTD4Q8WVF5 259 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DCPSQ96C86 337 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 CERS2Q96G23 380 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 SMARCAD1Q9H4L7 1026 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 NOL11Q9H8H0 719 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 MYOZ2Q9NPC6 264 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DNAJC28Q9NX36 388 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PSMD13Q9UNM6 376 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TJP1Q07157 1748 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 CLUHO75153 1309 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 RGS5O15539 181 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 VNN1O95497 513 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 GJB1P08034 283 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 MYL3P08590 195 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 CYP51A1Q16850 503 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TRIM71Q2Q1W2 868 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 TRMT10BQ6PF06 316 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 UTS2BQ765I0 119 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 UBE2Q1Q7Z7E8 422 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 BBS5Q8N3I7 341 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TCAIMQ8N3R3 496 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ZNF781Q8N8C0 355 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 NAT8LQ8N9F0 302 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 LMO3Q8TAP4 145 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 DLG3Q92796 817 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 NARS2Q96I59 477 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 MAGEB5Q9BZ81 275 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 CLEC4MQ9H2X3 399 aaPredicted RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 FANCEQ9HB96 536 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TMCO1Q9UM00 188 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 POMPQ9Y244 141 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PCDHGA3Q9Y5H0 932 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 NR2E3Q9Y5X4 410 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PSMD3O43242 534 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TYROBPO43914 113 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PGK2P07205 417 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 GOT1P17174 413 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 BFSP2Q13515 415 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 KYAT1Q16773 422 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TATDN1Q6P1N9 297 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 MIER2Q8N344 545 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 TFAP2BQ92481 460 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 OTUD5Q96G74 571 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 EGFL8Q99944 293 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 HERPUD2Q9BSE4 406 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 ATXN3LQ9H3M9 355 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 PREBQ9HCU5 417 aa7.24□□□□□ -1.25
USP3-210ENST00000559192 OLA1Q9NTK5 396 aaKnown RBP7.24□□□□□ -1.25
USP3-210ENST00000559192 A0A087WZ62 844 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 TRMUO75648 421 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 CRTAMO95727 393 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 CAPSQ13938 189 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 NR1D2Q14995 579 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 ARMCX4Q5H9R4 360 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 IGDCC3Q8IVU1 814 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms