RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 LINGO4Q6UY18 593 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 LEKR1Q6ZMV7 388 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 DAAM2Q86T65 1068 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 TTC17Q96AE7 1141 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 HMCESQ96FZ2 354 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ZNF419Q96HQ0 510 aaPredicted RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 CIPCQ9C0C6 399 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 SLC39A8Q9C0K1 460 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 LRRC19Q9H756 370 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 TMEM51Q9NW97 253 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 TRMT1Q9NXH9 659 aaKnown RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 VPS51Q9UID3 782 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 RAD54BQ9Y620 910 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 A0A1W2PQF6 199 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 RASA4BC9J798 803 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 K7ESF4 209 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 RASA4O43374 803 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 KRT10P13645 584 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 CTNNA2P26232 953 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 CDKN2BP42772 138 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 SLC1A1P43005 524 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 TNFRSF4P43489 277 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 RPS9P46781 194 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 HCAR3P49019 387 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 AMPD2Q01433 879 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 ANKRD20A8PQ5CZ79 823 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 NCBP2-AS2Q69YL0 99 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 C1orf228Q6PIY5 440 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 TSSK4Q6SA08 328 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 SETD3Q86TU7 594 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 SUGP1Q8IWZ8 645 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 RHOT1Q8IXI2 618 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 KATNAL2Q8IYT4 538 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 UMODL1-AS1Q8N2C9 162 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 PLD5Q8N7P1 536 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 TXNDC5Q8NBS9 432 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 WFIKKN2Q8TEU8 576 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 RPL10LQ96L21 214 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 NELL2Q99435 816 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 NCAPGQ9BPX3 1015 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 CALN1Q9BXU9 219 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 SLC6A17Q9H1V8 727 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 TMEM245Q9H330 911 aa11.17□□□□□ -0.62
TPM1-217ENST00000559108 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 MRPS17Q9Y2R5 130 aaKnown RBP11.17□□□□□ -0.62
TPM1-217ENST00000559108 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 ILVBLA1L0T0 632 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 H3BRJ5 948 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 FGF10O15520 208 aaPredicted RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 ZNF821O75541 412 aaPredicted RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 KRT7P08729 469 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 PYGMP11217 842 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 PECAM1P16284 738 aaPredicted RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 MAPKAPK2P49137 400 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 NAP1L1P55209 391 aaKnown RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 GBE1Q04446 702 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 LRRC32Q14392 662 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 KRT81Q14533 505 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 HADHQ16836 314 aaKnown RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 ACBD5Q5T8D3 534 aaPredicted RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 NPNTQ6UXI9 565 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 SPOCD1Q6ZMY3 1216 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 RNF10Q8N5U6 811 aaKnown RBP11.16□□□□□ -0.62
TPM1-217ENST00000559108 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 FRS2Q8WU20 508 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 RNF157Q96PX1 679 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 GABRG3Q99928 467 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 ZNF670Q9BS34 389 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 CD93Q9NPY3 652 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 LCMT1Q9UIC8 334 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 VPS28Q9UK41 221 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 ERVW-1Q9UQF0 538 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms