RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IMPG2Q9BZV3 1241 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 ARRDC1-AS1Q9H2J1 176 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 KCTD10Q9H3F6 313 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 GOLPH3LQ9H4A5 285 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 CCSER2Q9H7U1 834 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 USP25Q9UHP3 1055 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SH3BP1Q9Y3L3 701 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 MYOFQ9NZM1 2061 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 MYO16Q9Y6X6 1858 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 TMEM82A0PJX8 343 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 SH3D21A4FU49 640 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 GOLGA6L4A6NEF3 574 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 PRR5-ARHGAP8B1AHC4 643 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 PDXKO00764 312 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 SLC9A3R1O14745 358 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 COCHO43405 550 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 AKAP3O75969 853 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 BEST1O76090 585 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 RTN3O95197 1032 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 PAPSS2O95340 614 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 KLF8O95600 359 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 APBB3O95704 486 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 OAS1P00973 400 aaKnown RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 FAM200BP0CF97 657 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 TRIM21P19474 475 aaKnown RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 OPRD1P41143 372 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 AP3M2P53677 418 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ATXN1P54253 815 aaKnown RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 ARHGAP8P85298 464 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 CREB5Q02930 508 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 DHCR24Q15392 516 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 SGSM1Q2NKQ1 1148 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ANO4Q32M45 955 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ZACNQ401N2 412 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 FBXO43Q4G163 708 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 LY6G5CQ5SRR4 150 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 HECTD3Q5T447 861 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 TCEAL6Q6IPX3 200 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 RPTNQ6XPR3 784 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 KRBA2Q6ZNG9 492 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 CACNA2D4Q7Z3S7 1137 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 FUKQ8N0W3 1084 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 TAS1R2Q8TE23 839 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ERCC4Q92889 916 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 TCEAL3Q969E4 200 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 SMOQ99835 787 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 TTLL2Q9BWV7 592 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 FOXP3Q9BZS1 431 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ARHGEF4Q9NR80 690 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 DMAC2Q9NW81 257 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 DLL3Q9NYJ7 618 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
SPG11-213ENST00000558988 ING1Q9UK53 422 aaPredicted RBP7.73□□□□□ -1.17
SPG11-213ENST00000558988 NUDT5Q9UKK9 219 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 HPSEQ9Y251 543 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
SPG11-213ENST00000558988 CEP250Q9BV73 2442 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 MDM4O15151 490 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ZNF202O95125 648 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ASS1P00966 412 aaKnown RBP7.72□□□□□ -1.17
SPG11-213ENST00000558988 APODP05090 189 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ACO1P21399 889 aaKnown RBP7.72□□□□□ -1.17
SPG11-213ENST00000558988 MPLP40238 635 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 WASP42768 502 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PPP3CCP48454 512 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PGFP49763 221 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 SLC7A9P82251 487 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 HNRNPA0Q13151 305 aaKnown RBP7.72□□□□□ -1.17
SPG11-213ENST00000558988 ADAM9Q13443 819 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PNOCQ13519 176 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ELF2Q15723 593 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 CSRP2Q16527 193 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 DCAF17Q5H9S7 520 aaPredicted RBP7.72□□□□□ -1.17
SPG11-213ENST00000558988 C1orf220Q5T0J3 134 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 EMC10Q5UCC4 262 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 BTBD8Q5XKL5 378 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 TPGS1Q6ZTW0 290 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PAQR9Q6ZVX9 377 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 GPRIN1Q7Z2K8 1008 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
SPG11-213ENST00000558988 BBS7Q8IWZ6 715 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ALLCQ8N6M5 410 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 CCDC150Q8NCX0 1101 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 ZMIZ2Q8NF64 920 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 USP33Q8TEY7 942 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 HMGB4Q8WW32 186 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 RLN3Q8WXF3 142 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 WBP2Q969T9 261 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 CEP295NLQ96MC4 621 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 TWNKQ96RR1 684 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 PNKPQ96T60 521 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 APOBEC3GQ9HC16 384 aaKnown RBP7.72□□□□□ -1.17
SPG11-213ENST00000558988 PMF1-BGLAPU3KQ54 211 aa7.72□□□□□ -1.17
SPG11-213ENST00000558988 SPAG17Q6Q759 2223 aa7.71□□□□□ -1.17
SPG11-213ENST00000558988 TBC1D3BA6NDS4 549 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 NEDD8-MDP1E9PL57 170 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 K7EQS6 105 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TLR5O60602 858 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms