RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 PLK4O00444 970 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 NPC1O15118 1278 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 CLDN11O75508 207 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 CTSLP07711 333 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 SRCP12931 536 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 MIPP30301 263 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 ECT2LQ008S8 904 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 SF3A2Q15428 464 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 USP39Q53GS9 565 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 LINGO4Q6UY18 593 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 MSANTD4Q8NCY6 345 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 OR2T3Q8NH03 318 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 C1orf216Q8TAB5 229 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF653Q96CK0 615 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 LOXL4Q96JB6 756 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 KCTD15Q96SI1 283 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 SNRNP25Q9BV90 132 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 EBF2Q9HAK2 575 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 MYO1AQ9UBC5 1043 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
RABGGTA-207ENST00000558936 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ATP9BO43861 1147 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 IL4RP24394 825 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ACSL1P33121 698 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF75DP51815 510 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TPM4P67936 248 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 SLC25A11Q02978 314 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ATP13A4Q4VNC1 1196 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 FNDC3BQ53EP0 1204 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TDRD12Q587J7 1177 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 RABGAP1LQ5R372 815 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 SLFN11Q7Z7L1 901 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 STK40Q8N2I9 435 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 SH2D3CQ8N5H7 860 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 AADATQ8N5Z0 425 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 OR8K1Q8NGG5 319 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 FNIP1Q8TF40 1166 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 FAM131CQ96AQ9 280 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 PRDM16Q9HAZ2 1276 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 SEMA4GQ9NTN9 838 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 SPTLC3Q9NUV7 552 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TMEM248Q9NWD8 314 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TP53BP1Q12888 1972 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 TMEM131Q92545 1883 aa12.97□□□□□ -0.33
RABGGTA-207ENST00000558936 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 LRP3O75074 770 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 SRPRAP08240 638 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ITPKAP23677 461 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 PSMA2P25787 234 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 MAOBP27338 520 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 L1CAMP32004 1257 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 DRD3P35462 400 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ARSEP51690 589 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 TAS2R40P59535 323 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF177Q13360 481 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 SLC12A1Q13621 1099 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 CSRP2Q16527 193 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 SETD3Q86TU7 594 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 GPR161Q8N6U8 529 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 NPWQ8N729 165 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF557Q8N988 423 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 KDM1BQ8NB78 822 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 CHST14Q8NCH0 376 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ARHGEF2Q92974 986 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 RMDN1Q96DB5 314 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 TOE1Q96GM8 510 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 ETNK2Q9NVF9 386 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 HS3ST2Q9Y278 367 aa12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 BZW2Q9Y6E2 419 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-207ENST00000558936 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms