RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 IL17RCQ8NAC3 791 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 TTC17Q96AE7 1141 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 ACOX2Q99424 681 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 PSMB7Q99436 277 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 ZNF670Q9BS34 389 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 NOL6Q9H6R4 1146 aaKnown RBP17.89■□□□□ 0.45
TPM1-214ENST00000558544 ETNK2Q9NVF9 386 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 RCOR3Q9P2K3 495 aaPredicted RBP17.89■□□□□ 0.45
TPM1-214ENST00000558544 AMFRQ9UKV5 643 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 CACNA1IQ9P0X4 2223 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 DCLK1O15075 740 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ZSCAN12O43309 604 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 TIMM44O43615 452 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ATP5BP06576 529 aaKnown RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 CTNNA1P35221 906 aaKnown RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 ACVRL1P37023 503 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 WASP42768 502 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ZNF234Q14588 700 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 PTPRNQ16849 979 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ANKRD20A8PQ5CZ79 823 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ZNF783Q6ZMS7 281 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 CHPFQ8IZ52 775 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 TXNDC5Q8NBS9 432 aaKnown RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 NETO2Q8NC67 525 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 RNF25Q96BH1 459 aaPredicted RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 CELF6Q96J87 481 aaKnown RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 SPON2Q9BUD6 331 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 ATP13A1Q9HD20 1204 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 POLR3BQ9NW08 1133 aaPredicted RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 C2orf42Q9NWW7 574 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 CACNA2D2Q9NY47 1150 aa17.88■□□□□ 0.45
TPM1-214ENST00000558544 THAP10Q9P2Z0 257 aaPredicted RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 PACSIN2Q9UNF0 486 aaPredicted RBP17.88■□□□□ 0.45
TPM1-214ENST00000558544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.88■□□□□ 0.45
TPM1-214ENST00000558544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.88■□□□□ 0.45
TPM1-214ENST00000558544 C3orf70A6NLC5 250 aaPredicted RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 CHURC1-FNTBB4DL54 471 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 SNAP91O60641 907 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 ASLP04424 464 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 DLDP09622 509 aaKnown RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 HNRNPLP14866 589 aaKnown RBP eCLIP17.87■□□□□ 0.451e-7■■□□□ 12.2
TPM1-214ENST00000558544 GLDCP23378 1020 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 CTNNA2P26232 953 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 IL12RB1P42701 662 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 ECT2LQ008S8 904 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 POLD3Q15054 466 aaPredicted RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 FNDC3BQ53EP0 1204 aaKnown RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 IL31Q6EBC2 164 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 TRMT11Q7Z4G4 463 aaKnown RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 ZNF354CQ86Y25 554 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 REXO1L1PQ8IX06 675 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 KATNAL2Q8IYT4 538 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 UMODL1-AS1Q8N2C9 162 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 NPWQ8N729 165 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 DCAF4L2Q8NA75 395 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 PCDH19Q8TAB3 1148 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 KCNV2Q8TDN2 545 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 ARHGEF2Q92974 986 aaKnown RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 ACDQ96AP0 544 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 FAF2Q96CS3 445 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 ALS2CR12Q96Q35 445 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 IER2Q9BTL4 223 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 KLC2Q9H0B6 622 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 MAGEH1Q9H213 219 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 SPATA6Q9NWH7 488 aaPredicted RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
TPM1-214ENST00000558544 DONSONQ9NYP3 566 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 VPS51Q9UID3 782 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 ERVW-1Q9UQF0 538 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
TPM1-214ENST00000558544 CCDC66A2RUB6 948 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 WASH3PC4AMC7 463 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 RASA4BC9J798 803 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 SGK1O00141 431 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 RASA4O43374 803 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 ADAM23O75077 832 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 ATG13O75143 517 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 STK19P49842 368 aaPredicted RBP17.86■□□□□ 0.45
TPM1-214ENST00000558544 SULT2A1Q06520 285 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 TMCO3Q6UWJ1 677 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 MFSD7Q6UXD7 560 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 SPEM1Q8N4L4 309 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 DTWD2Q8NBA8 298 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 HMCESQ96FZ2 354 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 RPL10LQ96L21 214 aaKnown RBP17.86■□□□□ 0.45
TPM1-214ENST00000558544 MRGPRX3Q96LB0 322 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 C2orf49Q9BVC5 232 aaPredicted RBP17.86■□□□□ 0.45
TPM1-214ENST00000558544 LRRC19Q9H756 370 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 SLC25A13Q9UJS0 675 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 MMP17Q9ULZ9 603 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 PLA2G4CQ9UP65 541 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 STON1Q9Y6Q2 735 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 WDFY4Q6ZS81 3184 aa17.86■□□□□ 0.45
TPM1-214ENST00000558544 USP27XA6NNY8 438 aa17.85■□□□□ 0.45
TPM1-214ENST00000558544 CBX4O00257 560 aa17.85■□□□□ 0.45
TPM1-214ENST00000558544 HLA-EP13747 358 aa17.85■□□□□ 0.45
TPM1-214ENST00000558544 PRKCHP24723 683 aa17.85■□□□□ 0.45
TPM1-214ENST00000558544 NTSR1P30989 418 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms