RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 KIAA1614Q5VZ46 1190 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 CCDC81Q6ZN84 652 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 LGI2Q8N0V4 545 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 APOLD1Q96LR9 279 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 MYOCQ99972 504 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 DUSP23Q9BVJ7 150 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 CALN1Q9BXU9 219 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 ASCL3Q9NQ33 180 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 WDR70Q9NW82 654 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 SATB2Q9UPW6 733 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 TLR6Q9Y2C9 796 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 CA5BQ9Y2D0 317 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 K7ENP7 123 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC31A1O15431 190 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 APOEP02649 317 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 VAV1P15498 845 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC12A1Q13621 1099 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 INO80CQ6PI98 192 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 MYEOVQ96EZ4 313 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 PPP1R9BQ96SB3 815 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 NLGN3Q9NZ94 848 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 MAPK8IP1Q9UQF2 711 aa18.37■□□□□ 0.53
TSPAN3-204ENST00000558394 O00370 1275 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 ACTN4O43707 911 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 PIAS2O75928 621 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 AKT2P31751 481 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 NUMBP49757 651 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 METAP1P53582 386 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 CCDC15Q0P6D6 951 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 CNTN1Q12860 1018 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 CUL2Q13617 745 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 ISXQ2M1V0 245 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 FOXD4L5Q5VV16 416 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 IFI44Q8TCB0 444 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 FOXD4L4Q8WXT5 416 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 RNF34Q969K3 372 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC25A13Q9UJS0 675 aa18.36■□□□□ 0.53
TSPAN3-204ENST00000558394 FBXO21O94952 628 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 EPB41P11171 864 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 MYF5P13349 255 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 OXCT1P55809 520 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 NFATC3Q12968 1075 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 NNTQ13423 1086 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 AGBL4Q5VU57 503 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 IGF2-ASQ6U949 168 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 LCLAT1Q6UWP7 414 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 TMEM145Q8NBT3 493 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 MIS12Q9H081 205 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 USP25Q9UHP3 1055 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 SARDHQ9UL12 918 aa18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-204ENST00000558394 F5H5T6 163 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 M0QYV0 167 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 BNIP3LO60238 219 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 PRLRP16471 622 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 TACR2P21452 398 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 TCERG1LQ5VWI1 586 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 PMF1Q6P1K2 205 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 FOXR1Q6PIV2 292 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 ARL14Q8N4G2 192 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 CLEC4CQ8WTT0 213 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC35F5Q8WV83 523 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 KLK6Q92876 244 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 ERCC4Q92889 916 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 HSFY1Q96LI6 401 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC46A1Q96NT5 459 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 DYRK4Q9NR20 520 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 DNAJC28Q9NX36 388 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 NCKIPSDQ9NZQ3 722 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 IL17BQ9UHF5 180 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 SLC12A6Q9UHW9 1150 aa18.34■□□□□ 0.53
TSPAN3-204ENST00000558394 PIEZO2Q9H5I5 2752 aa18.33■□□□□ 0.53
TSPAN3-204ENST00000558394 A0A1W2PQU0 124 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 CPED1A4D0V7 1026 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 SCAMP1O15126 338 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 ALOX15BO15296 676 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 KRT10P13645 584 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 HNRNPA2B1P22626 353 aaKnown RBP18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 HNRNPKP61978 463 aaKnown RBP eCLIP18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 DCAF17Q5H9S7 520 aaPredicted RBP18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 NEK5Q6P3R8 708 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 OR13H1Q8NG92 308 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms