RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CHRNA3P32297 505 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 RPL34P49207 117 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 ZNF844Q08AG5 666 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TRADDQ15628 312 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 DCAF12L1Q5VU92 463 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 FYB2Q5VWT5 728 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 BSPRYQ5W0U4 402 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 GRAMD4Q6IC98 578 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ANO7Q6IWH7 933 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DENND1CQ8IV53 801 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SCML4Q8N228 414 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 XPO6Q96QU8 1125 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 FMO2Q99518 471 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 MIS12Q9H081 205 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SEMA4GQ9NTN9 838 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TMEM51Q9NW97 253 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SFMBT1Q9UHJ3 866 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CYTH4Q9UIA0 394 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 INVSQ9Y283 1065 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ZNF510Q9Y2H8 683 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 MYO18AQ92614 2054 aaKnown RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 RALGAPA1Q6GYQ0 2036 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 TCRBV5S1A1TA0A578 114 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 PRRT4C9JH25 899 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 LRP3O75074 770 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 EPN2O95208 641 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 FAM107AO95990 144 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 PENKP01210 267 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 RRM1P23921 792 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 DGKGP49619 791 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 SNX16P57768 344 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 DR1Q01658 176 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 TRIP4Q15650 581 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 CCDC6Q16204 474 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 PLK5Q496M5 336 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 TTC31Q49AM3 519 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 HSF5Q4G112 596 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 PREPLQ4J6C6 727 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 PTPN20Q4JDL3 420 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 EGFLAMQ63HQ2 1017 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 KCTD16Q68DU8 428 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 MMS22LQ6ZRQ5 1243 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 HOOK3Q86VS8 718 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 ZNF513Q8N8E2 541 aaPredicted RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 PLD4Q96BZ4 506 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 ZC3H10Q96K80 434 aaKnown RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 ACOX2Q99424 681 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 SLC4A5Q9BY07 1137 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 DCLK3Q9C098 648 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 NEUROG2Q9H2A3 272 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 CNOT10Q9H9A5 744 aaKnown RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 MRPL47Q9HD33 250 aaKnown RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 ABCC13Q9NSE7 274 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 OLA1Q9NTK5 396 aaKnown RBP10.62□□□□□ -0.71
TPM1-212ENST00000558347 DLL3Q9NYJ7 618 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 PCYOX1Q9UHG3 505 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 FBXO10Q9UK96 956 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 STARD13Q9Y3M8 1113 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 SCINQ9Y6U3 715 aa10.62□□□□□ -0.71
TPM1-212ENST00000558347 SDK1Q7Z5N4 2213 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 MYO1FO00160 1098 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 MSI1O43347 362 aaKnown RBP10.61□□□□□ -0.71
TPM1-212ENST00000558347 KIAA0754O94854 1291 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 NUDT17P0C025 328 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 BCKDHBP21953 392 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CHKAP35790 457 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 WASP42768 502 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 PPP2R2AP63151 447 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 LMNB2Q03252 620 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CSRP2Q16527 193 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 EOGTQ5NDL2 527 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 SEL1L2Q5TEA6 688 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 PRR23CQ6ZRP0 262 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 TMEM110Q86TL2 294 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 NLRP14Q86W24 1093 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 FAM217AQ8IXS0 508 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 ZNF564Q8TBZ8 553 aaPredicted RBP10.61□□□□□ -0.71
TPM1-212ENST00000558347 KCNV2Q8TDN2 545 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 IPO4Q8TEX9 1081 aaKnown RBP10.61□□□□□ -0.71
TPM1-212ENST00000558347 RNF139Q8WU17 664 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 UBLCP1Q8WVY7 318 aaPredicted RBP10.61□□□□□ -0.71
TPM1-212ENST00000558347 CENPTQ96BT3 561 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 C18orf8Q96DM3 657 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 LOXL4Q96JB6 756 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 HSFY1Q96LI6 401 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CPXM1Q96SM3 734 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 NUP85Q9BW27 656 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 ZDHHC18Q9NUE0 388 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms