RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PRRX2Q99811 253 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 GABRG3Q99928 467 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 KLHL11Q9NVR0 708 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 DONSONQ9NYP3 566 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 ERVW-1Q9UQF0 538 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 MACROD2A1Z1Q3 448 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 RAMP2O60895 175 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 TNNT1P13805 278 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 ERCC2P18074 760 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 ARSEP51690 589 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 ST8SIA6P61647 398 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 CSTF1Q05048 431 aaKnown RBP26.19■■□□□ 1.78
SMAD6-202ENST00000557916 ENPP2Q13822 863 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 CRY1Q16526 586 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 IFI16Q16666 785 aaKnown RBP26.19■■□□□ 1.78
SMAD6-202ENST00000557916 LRRC38Q5VT99 294 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 SERPINA13PQ6UXR4 307 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 FAM71BQ8TC56 605 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 CSPG4P5Q96PW8 444 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 PSMB7Q99436 277 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 SPON2Q9BUD6 331 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 C2orf49Q9BVC5 232 aaPredicted RBP26.19■■□□□ 1.78
SMAD6-202ENST00000557916 MAGEH1Q9H213 219 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 FBXO4Q9UKT5 387 aa26.19■■□□□ 1.78
SMAD6-202ENST00000557916 MYO18AQ92614 2054 aaKnown RBP26.19■■□□□ 1.78
SMAD6-202ENST00000557916 SRPRAP08240 638 aaKnown RBP26.18■■□□□ 1.78
SMAD6-202ENST00000557916 CCDC175P0C221 793 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 HOXB2P14652 356 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 ETFBP38117 255 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 DPYSQ14117 519 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 PDK2Q15119 407 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 TSSK4Q6SA08 328 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 TMEM92Q6UXU6 159 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 MAP7D3Q8IWC1 876 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 TSC1Q92574 1164 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 RPL10LQ96L21 214 aaKnown RBP26.18■■□□□ 1.78
SMAD6-202ENST00000557916 MRGPRX3Q96LB0 322 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 TSGA10Q9BZW7 698 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 ATP13A1Q9HD20 1204 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 RCOR3Q9P2K3 495 aaPredicted RBP26.18■■□□□ 1.78
SMAD6-202ENST00000557916 CACNA1IQ9P0X4 2223 aa26.18■■□□□ 1.78
SMAD6-202ENST00000557916 K7ESF4 209 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 CD48P09326 243 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 DGKEP52429 567 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 DPYSL3Q14195 570 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 POLD3Q15054 466 aaPredicted RBP26.17■■□□□ 1.78
SMAD6-202ENST00000557916 IL31Q6EBC2 164 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 UMODL1-AS1Q8N2C9 162 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 DCAF4L2Q8NA75 395 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 ARHGEF2Q92974 986 aaKnown RBP26.17■■□□□ 1.78
SMAD6-202ENST00000557916 HHIPQ96QV1 700 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 CALN1Q9BXU9 219 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 VPS51Q9UID3 782 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 SLC25A13Q9UJS0 675 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 RAD54BQ9Y620 910 aa26.17■■□□□ 1.78
SMAD6-202ENST00000557916 KRT86O43790 486 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 SNAP91O60641 907 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 AMPD1P23109 780 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 IL4RP24394 825 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 PRKCHP24723 683 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 ACVRL1P37023 503 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 STK19P49842 368 aaPredicted RBP26.16■■□□□ 1.78
SMAD6-202ENST00000557916 KDM1BQ8NB78 822 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 TSTD1Q8NFU3 115 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 KIAA1524Q8TCG1 905 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 RAPGEF5Q92565 580 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 MYO19Q96H55 970 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 TMEM245Q9H330 911 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 NOL6Q9H6R4 1146 aaKnown RBP26.16■■□□□ 1.78
SMAD6-202ENST00000557916 POLMQ9NP87 494 aaPredicted RBP26.16■■□□□ 1.78
SMAD6-202ENST00000557916 SLCO3A1Q9UIG8 710 aa26.16■■□□□ 1.78
SMAD6-202ENST00000557916 A0A1W2PQF6 199 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 CBX4O00257 560 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 PSTPIP1O43586 416 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 EPHX1P07099 455 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 HLA-EP13747 358 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 COL9A1P20849 921 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 KDELR1P24390 212 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 NNMTP40261 264 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 YBEYP58557 167 aaPredicted RBP26.15■■□□□ 1.78
SMAD6-202ENST00000557916 MMRN1Q13201 1228 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 STARD3Q14849 445 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 CAMKK1Q8N5S9 505 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 PRSS33Q8NF86 280 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 ERLEC1Q96DZ1 483 aa26.15■■□□□ 1.78
SMAD6-202ENST00000557916 ZNF830Q96NB3 372 aaPredicted RBP26.15■■□□□ 1.78
SMAD6-202ENST00000557916 ACE2Q9BYF1 805 aaPredicted RBP26.15■■□□□ 1.78
SMAD6-202ENST00000557916 DDX56Q9NY93 547 aaKnown RBP26.15■■□□□ 1.78
SMAD6-202ENST00000557916 LRRD1A4D1F6 860 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 GRID2IPA4D2P6 1211 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 RASA4BC9J798 803 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 RASA4O43374 803 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 TDGF1P13385 188 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 GLDCP23378 1020 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 PARP15Q460N3 678 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 KIAA1211LQ6NV74 962 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 ZNF354CQ86Y25 554 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 RNF10Q8N5U6 811 aaKnown RBP26.14■■□□□ 1.78
SMAD6-202ENST00000557916 ZNF366Q8N895 744 aa26.14■■□□□ 1.78
SMAD6-202ENST00000557916 LRRC57Q8N9N7 239 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms