RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 CHRDQ9H2X0 955 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 CATSPERBQ9H7T0 1116 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 KIAA1522Q9P206 1035 aaPredicted RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 GMEB2Q9UKD1 530 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 NEU3Q9UQ49 428 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 MAP1BP46821 2468 aaKnown RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 GRID2IPA4D2P6 1211 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 PRRT4C9JH25 899 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 H3BRJ5 948 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 K7EQS6 105 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 RNF40O75150 1001 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 PALMO75781 387 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 RHOCP08134 193 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 GOT1P17174 413 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 HTR7P34969 479 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 CSKP41240 450 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 NUMBP49757 651 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 OXCT1P55809 520 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 FBXO43Q4G163 708 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 ARTNQ5T4W7 220 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 EZH1Q92800 747 aaPredicted RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 MUC3BQ9H195 1237 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 PCDH18Q9HCL0 1135 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 CWC15Q9P013 229 aaKnown RBP12.57□□□□□ -0.4
RCCD1-209ENST00000557750 DNAI1Q9UI46 699 aa12.57□□□□□ -0.4
RCCD1-209ENST00000557750 ZFHX4Q86UP3 3567 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 A0A0A0MRY4 1105 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 HOXC13P31276 330 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 TNFRSF4P43489 277 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 MAPKAPK2P49137 400 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 NRLP54845 237 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 FUT11Q495W5 492 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 LRRC38Q5VT99 294 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 Q6ZS52 159 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 SETD3Q86TU7 594 aaPredicted RBP12.56□□□□□ -0.4
RCCD1-209ENST00000557750 NLRP14Q86W24 1093 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 MAP7D3Q8IWC1 876 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 SYCE1Q8N0S2 351 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.56□□□□□ -0.4
RCCD1-209ENST00000557750 RTL3Q8N8U3 475 aaKnown RBP12.56□□□□□ -0.4
RCCD1-209ENST00000557750 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 TBC1D30Q9Y2I9 924 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 CAPN6Q9Y6Q1 641 aa12.56□□□□□ -0.4
RCCD1-209ENST00000557750 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 PSTPIP1O43586 416 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 KRT1P04264 644 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 CD48P09326 243 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 TIE1P35590 1138 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 SLC12A1Q13621 1099 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 EIF4HQ15056 248 aaKnown RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 PDK2Q15119 407 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 PLEKHG6Q3KR16 790 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 DNTTIP2Q5QJE6 756 aaKnown RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 EMC10Q5UCC4 262 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 RNF219Q5W0B1 726 aaPredicted RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 MBLAC2Q68D91 279 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 PEX26Q7Z412 305 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ADIPOR2Q86V24 386 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 SYNPOQ8N3V7 929 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 LRRC57Q8N9N7 239 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 OR52K2Q8NGK3 314 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 UCMAQ8WVF2 138 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 SORCS1Q8WY21 1168 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 LMLNQ96KR4 655 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 CSPG4P5Q96PW8 444 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 RETREG1Q9H6L5 497 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ZDHHC4Q9NPG8 344 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 DONSONQ9NYP3 566 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 RAB23Q9ULC3 237 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
RCCD1-209ENST00000557750 CHD6Q8TD26 2715 aa12.55□□□□□ -0.4
RCCD1-209ENST00000557750 A0A0D9SEW6 157 aa12.54□□□□□ -0.4
RCCD1-209ENST00000557750 TIMM44O43615 452 aa12.54□□□□□ -0.4
RCCD1-209ENST00000557750 RAMP2O60895 175 aa12.54□□□□□ -0.4
RCCD1-209ENST00000557750 FTCDO95954 541 aa12.54□□□□□ -0.4
RCCD1-209ENST00000557750 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
RCCD1-209ENST00000557750 ERCC2P18074 760 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms