RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 SLC22A25Q6T423 547 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 IL27RAQ6UWB1 636 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 ZNF783Q6ZMS7 281 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 BTN2A1Q7KYR7 527 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 USP37Q86T82 979 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 NLRP14Q86W24 1093 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 C2CD5Q86YS7 1000 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 EGFL6Q8IUX8 553 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 NGEFQ8N5V2 710 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 CELF5Q8N6W0 485 aaKnown RBP3.61□□□□□ -1.83
FOXN3-217ENST00000557572 ATP11CQ8NB49 1132 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 OR1N1Q8NGS0 311 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 OTUD7AQ8TE49 926 aaPredicted RBP3.61□□□□□ -1.83
FOXN3-217ENST00000557572 ATP2A3Q93084 1043 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 RSPRY1Q96DX4 576 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 CNDP2Q96KP4 475 aaKnown RBP3.61□□□□□ -1.83
FOXN3-217ENST00000557572 C2orf40Q9H1Z8 148 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 GLOD4Q9HC38 313 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 KRT84Q9NSB2 600 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 MRPS18AQ9NVS2 196 aaKnown RBP3.61□□□□□ -1.83
FOXN3-217ENST00000557572 STK32BQ9NY57 414 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 RPS6KA6Q9UK32 745 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 OGDHLQ9ULD0 1010 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 ICAM5Q9UMF0 924 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 MAN2B2Q9Y2E5 1009 aa3.61□□□□□ -1.83
FOXN3-217ENST00000557572 ZFP37Q9Y6Q3 630 aaPredicted RBP3.61□□□□□ -1.83
FOXN3-217ENST00000557572 RUSC2Q8N2Y8 1516 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 A1L4Q6 167 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 H0Y626 953 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 SPTLC2O15270 562 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 SLC16A6O15403 523 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 PHGDHO43175 533 aaKnown RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 FTLP02792 175 aaPredicted RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 FESP07332 822 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 HNRNPA1P09651 372 aaKnown RBP eCLIP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 STMN1P16949 149 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 DESP17661 470 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 SLC7A1P30825 629 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 ABCD1P33897 745 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 HNF4AP41235 474 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 CXCR3P49682 368 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 PPP5CP53041 499 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 SUMO3P55854 103 aaPredicted RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 NKX6-1P78426 367 aaPredicted RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 BOP1Q14137 746 aaKnown RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 FGL2Q14314 439 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 PPA1Q15181 289 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 CTXN3Q4LDR2 81 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 KHDC1Q4VXA5 237 aaKnown RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 KRTCAP3Q53RY4 240 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 ISM2Q6H9L7 571 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 CNSTQ6PJW8 725 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 OR8H3Q8N146 312 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 ZNF619Q8N2I2 560 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.6□□□□□ -1.83
FOXN3-217ENST00000557572 FAM71BQ8TC56 605 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 NUDCD2Q8WVJ2 157 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 ATG4AQ8WYN0 398 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 SPATA17Q96L03 361 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 COG8Q96MW5 612 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 TIGD1Q96MW7 591 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 ITPAQ9BY32 194 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 COL20A1Q9P218 1284 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 HESX1Q9UBX0 185 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 GTF3C4Q9UKN8 822 aa3.6□□□□□ -1.83
FOXN3-217ENST00000557572 AGAP14A8MT82 685 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 TMEM232C9JQI7 657 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 PLOD2O00469 737 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 UBE2CO00762 179 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 PIP5K1BO14986 540 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 IPO8O15397 1037 aaKnown RBP3.59□□□□□ -1.83
FOXN3-217ENST00000557572 SRGAP2O75044 1071 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 TMEM63AO94886 807 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 PDE8BO95263 885 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 NDST3O95803 873 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 GNAI2P04899 355 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 ITGA5P08648 1049 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 CSF1P09603 554 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 THEGLP0DJG4 465 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 PIM1P11309 404 aaPredicted RBP3.59□□□□□ -1.83
FOXN3-217ENST00000557572 NPR1P16066 1061 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 CCR9P51686 369 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 LIMK1P53667 647 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 PRKAA2P54646 552 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 RRP1P56182 461 aaKnown RBP3.59□□□□□ -1.83
FOXN3-217ENST00000557572 ARF3P61204 181 aaPredicted RBP3.59□□□□□ -1.83
FOXN3-217ENST00000557572 VAMP2P63027 116 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 ARF1P84077 181 aaKnown RBP3.59□□□□□ -1.83
FOXN3-217ENST00000557572 IL1RL1Q01638 556 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 CREB5Q02930 508 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 CHRNDQ07001 517 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 IFT88Q13099 833 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 SLC12A1Q13621 1099 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 ACVR2BQ13705 512 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 TRIM29Q14134 588 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 EFR3AQ14156 821 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 FAM187BQ17R55 369 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 C3orf38Q5JPI3 329 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 C1orf141Q5JVX7 400 aa3.59□□□□□ -1.83
FOXN3-217ENST00000557572 SHQ1Q6PI26 577 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms