RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MROH8Q9H579 483 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ARL8BQ9NVJ2 186 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ARPP21Q9UBL0 812 aaPredicted RBP5.09□□□□□ -1.59
PRPF39-212ENST00000557477 CD207Q9UJ71 328 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 PTPRTO14522 1441 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PLCH2O75038 1416 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 FAM90A7PA6NKC0 464 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 FAM90A22PA8MWA6 464 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 FAM90A23PA8MXZ1 464 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 B4E171 279 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 DSCR3O14972 297 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 IFIT1P09914 478 aaKnown RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PSMC2P35998 433 aaKnown RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 GGT5P36269 586 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 TSPAN7P41732 249 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 CCT4P50991 539 aaKnown RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 COL10A1Q03692 680 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PFKFB3Q16875 520 aaPredicted RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 SH2D4BQ5SQS7 431 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 DHRS13Q6UX07 377 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 C1orf122Q6ZSJ8 110 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 LRRC8DQ7L1W4 858 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 RHPN2Q8IUC4 686 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 TSPYL6Q8N831 410 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PNLDC1Q8NA58 520 aaKnown RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 SLC16A11Q8NCK7 471 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 C2CD4CQ8TF44 421 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 RNF125Q96EQ8 232 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PKNOX2Q96KN3 472 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 ZNF347Q96SE7 839 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 TTYH1Q9H313 450 aaPredicted RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 ZHX3Q9H4I2 956 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 JMJD4Q9H9V9 463 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PREBQ9HCU5 417 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 MLXIPLQ9NP71 852 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 HDAC6Q9UBN7 1215 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 SLC25A13Q9UJS0 675 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 PKP3Q9Y446 797 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 DMRT1Q9Y5R6 373 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 SUPT6HQ7KZ85 1726 aaKnown RBP5.08□□□□□ -1.6
PRPF39-212ENST00000557477 C3P01024 1663 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 CAMSAP1Q5T5Y3 1602 aa5.08□□□□□ -1.6
PRPF39-212ENST00000557477 STRCQ7RTU9 1775 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ZNF335Q9H4Z2 1342 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 SH2D7A6NKC9 451 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 C17orf100A8MU93 164 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 UBE2Q2LH0YL09 131 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 CYR61O00622 381 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 SYN3O14994 580 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 METTL18O95568 372 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 CHRM5P08912 532 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 CYP2A6P11509 494 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 CYP4B1P13584 511 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TNNT1P13805 278 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 PKMP14618 531 aaKnown RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TGM2P21980 687 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ABCD3P28288 659 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 SOX2P48431 317 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 INHBCP55103 352 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 GPR68Q15743 365 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 GPR162Q16538 588 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 NFIL3Q16649 462 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 PROSER3Q2NL68 480 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ANXA2RQ3ZCQ2 193 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ARL13AQ5H913 290 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 UBAP2Q5T6F2 1119 aaKnown RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 PRAMEF17Q5VTA0 474 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ZNF474Q6S9Z5 364 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TMEM200AQ86VY9 491 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 BRSK2Q8IWQ3 736 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 AFAP1Q8N556 730 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 FAM110DQ8TAY7 271 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ADAD1Q96M93 576 aaKnown RBP5.07□□□□□ -1.6
PRPF39-212ENST00000557477 FCRL5Q96RD9 977 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 TAOK3Q9H2K8 898 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 SEMA4GQ9NTN9 838 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 FBXO4Q9UKT5 387 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 CYP46A1Q9Y6A2 500 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 ABCA6Q8N139 1617 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 DIP2CQ9Y2E4 1556 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 IQSEC2Q5JU85 1478 aa5.07□□□□□ -1.6
PRPF39-212ENST00000557477 NCOA1Q15788 1441 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 FMN1Q68DA7 1419 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 CNTLNQ9NXG0 1405 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 TRAPPC8Q9Y2L5 1435 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 SPATA31A5Q5VU36 1347 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 SPATA31A6Q5VVP1 1343 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 SPATA31A7Q8IWB4 1347 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.06□□□□□ -1.6
PRPF39-212ENST00000557477 LRRC3CA6NJW4 275 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 TMEM232C9JQI7 657 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 MCIDASD6RGH6 385 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 ENO1P06733 434 aaKnown RBP5.06□□□□□ -1.6
PRPF39-212ENST00000557477 ST6GAL1P15907 406 aa5.06□□□□□ -1.6
PRPF39-212ENST00000557477 PRKCHP24723 683 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms