RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CERS4Q9HA82 394 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.37□□□□□ -1.71
CHD8-212ENST00000557329 MYO1AQ9UBC5 1043 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 CA14Q9ULX7 337 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 HPSEQ9Y251 543 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 TTC28Q96AY4 2481 aa4.37□□□□□ -1.71
CHD8-212ENST00000557329 KAT6AQ92794 2004 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 WIPF3A6NGB9 483 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 DSCR3O14972 297 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 ADAMTS3O15072 1205 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 TMEM225BP0DP42 221 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 MMP8P22894 467 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 KELP23276 732 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 PPP2R1AP30153 589 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 RGS2P41220 211 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 PLCD1P51178 756 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 RENBPP51606 427 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 CASP5P51878 434 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 HMGCS2P54868 508 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 FKBP1AP62942 108 aaKnown RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 HTRA4P83105 476 aaPredicted RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 SPP2Q13103 211 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 GALEQ14376 348 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 FAM110CQ1W6H9 321 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 CCDC57Q2TAC2 916 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 CAVIN4Q5BKX8 364 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 FAXCQ5TGI0 409 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 MANEALQ5VSG8 457 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 TMEM65Q6PI78 240 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 BCDIN3DQ7Z5W3 292 aaKnown RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 TTC30AQ86WT1 665 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 CCDC146Q8IYE0 955 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 SCYL3Q8IZE3 742 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 CCDC33Q8N5R6 958 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.36□□□□□ -1.71
CHD8-212ENST00000557329 FAM71DQ8N9W8 422 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 GPRC5AQ8NFJ5 357 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 PIGOQ8TEQ8 1089 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 FAM151AQ8WW52 585 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 OVCA2Q8WZ82 227 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 SMG7Q92540 1137 aaKnown RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 DPF1Q92782 380 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 EDC3Q96F86 508 aaKnown RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 HIC2Q96JB3 615 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 NUDT22Q9BRQ3 303 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 SELENOOQ9BVL4 669 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 RNF26Q9BY78 433 aaPredicted RBP4.36□□□□□ -1.71
CHD8-212ENST00000557329 GJD2Q9UKL4 321 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 AGTPBP1Q9UPW5 1226 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 AFG3L2Q9Y4W6 797 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 DOCK3Q8IZD9 2030 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 MYO9BQ13459 2157 aa4.36□□□□□ -1.71
CHD8-212ENST00000557329 ECM29Q5VYK3 1845 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 CYP2D7A0A087X1C5 515 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 PI4KAP2A4QPH2 592 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 POM121BA6NF01 834 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TISP43B9A030 160 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 INO80B-WBP1J3KQ70 363 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 DNM1LO00429 736 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 CLTBP09497 229 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 FGFR2P21802 821 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 EPHB2P29323 1055 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 GNALP38405 381 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 PIK3CBP42338 1070 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 STT3AP46977 705 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TLE2Q04725 743 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 LMOD3Q0VAK6 560 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 LMAN2Q12907 356 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 LARS2Q15031 903 aaKnown RBP4.35□□□□□ -1.71
CHD8-212ENST00000557329 TRIP6Q15654 476 aaKnown RBP4.35□□□□□ -1.71
CHD8-212ENST00000557329 RNASE12Q5GAN4 147 aaKnown RBP4.35□□□□□ -1.71
CHD8-212ENST00000557329 ARL6IP4Q66PJ3 421 aaKnown RBP4.35□□□□□ -1.71
CHD8-212ENST00000557329 MIS18BP1Q6P0N0 1132 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 CHSY1Q86X52 802 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 FSTL5Q8N475 847 aaPredicted RBP4.35□□□□□ -1.71
CHD8-212ENST00000557329 PI4KAP1Q8N8J0 262 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 C8orf58Q8NAV2 365 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 CUL5Q93034 780 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TNIP3Q96KP6 325 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 MMS19Q96T76 1030 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TMEM79Q9BSE2 394 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TM7SF3Q9NS93 570 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 TBC1D23Q9NUY8 699 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 VPS51Q9UID3 782 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 RIMKLBQ9ULI2 386 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 CORO2BQ9UQ03 480 aa4.35□□□□□ -1.71
CHD8-212ENST00000557329 A0A1W2PPC4 97 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 TTC34A8MYJ7 566 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 APOL1O14791 398 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 HGFP14210 728 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 MATN1P21941 496 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 ITGB8P26012 769 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 MAPK4P31152 587 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 ABCG1P45844 678 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 DIO1P49895 249 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 ITGA8P53708 1063 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 AK2P54819 239 aa4.34□□□□□ -1.71
CHD8-212ENST00000557329 SSBP2P81877 361 aaPredicted RBP4.34□□□□□ -1.71
CHD8-212ENST00000557329 HSF1Q00613 529 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms