RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DSG4Q86SJ6 1040 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 PROSER1Q86XN7 944 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 FAM114A1Q8IWE2 563 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3Q8IZP1 549 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-213ENST00000557262 ELF4Q99607 663 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-213ENST00000557262 SIK2Q9H0K1 926 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 KDM4CQ9H3R0 1056 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 NDST4Q9H3R1 872 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 RRN3Q9NYV6 651 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 SLC25A13Q9UJS0 675 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-213ENST00000557262 HS3ST4Q9Y661 456 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 A0A1W2PR77 199 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 ATP9BO43861 1147 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PAGE1O75459 146 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 CLDN11O75508 207 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 DAB1O75553 588 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 DRD3P35462 400 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 CDH4P55283 916 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 CENPCQ03188 943 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 DLG2Q15700 870 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 INAVAQ3KP66 663 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 VWA3BQ502W6 1294 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 SLC45A4Q5BKX6 768 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PRAMEF14Q5SWL7 426 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 FAM46CQ5VWP2 391 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 C14orf80Q86SX3 495 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 GALNT15Q8N3T1 639 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 OR52K2Q8NGK3 314 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 OR8D1Q8WZ84 308 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 SERAC1Q96JX3 654 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 NPY6RQ99463 290 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PDCL3Q9H2J4 239 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 CCDC86Q9H6F5 360 aaKnown RBP16.34■□□□□ 0.21
TUBB3-213ENST00000557262 WDCPQ9H6R7 721 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D30Q9Y2I9 924 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 OR51B4Q9Y5P0 310 aa16.34■□□□□ 0.21
TUBB3-213ENST00000557262 PKD1L2Q7Z442 2459 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 WNT9AO14904 365 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 MCF2LO15068 1137 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 SLC7A4O43246 635 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 F9P00740 461 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PNMA6AP0CW24 399 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-213ENST00000557262 ZNF18P17022 549 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 CXCR3P49682 368 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 IRAK1P51617 712 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
TUBB3-213ENST00000557262 IL9RQ01113 521 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PRPF39Q86UA1 669 aaKnown RBP16.33■□□□□ 0.2
TUBB3-213ENST00000557262 TMEM35BQ8NCS4 154 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 FAM131CQ96AQ9 280 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 GDF3Q9NR23 364 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PIGVQ9NUD9 493 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 TMEM51Q9NW97 253 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 ARHGEF38Q9NXL2 777 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.33■□□□□ 0.2
TUBB3-213ENST00000557262 VPS28Q9UK41 221 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 SARDHQ9UL12 918 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PPM1HQ9ULR3 514 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 STAP1Q9ULZ2 295 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 TMEM131Q92545 1883 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 PLXNB3Q9ULL4 1909 aa16.33■□□□□ 0.2
TUBB3-213ENST00000557262 TLR4O00206 839 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 PLK4O00444 970 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 ALOX15BO15296 676 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 LATO43561 262 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 RTN2O75298 545 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 ADCY5O95622 1261 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 ITGAVP06756 1048 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 DSPP15924 2871 aaKnown RBP16.32■□□□□ 0.2
TUBB3-213ENST00000557262 ERCC5P28715 1186 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-213ENST00000557262 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-213ENST00000557262 GGCXP38435 758 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 GABRB2P47870 512 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 METAP1P53582 386 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 KRT83P78385 493 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 DRAP1Q14919 205 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-213ENST00000557262 MIIPQ5JXC2 388 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 BRMS1LQ5PSV4 323 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 NT5C3BQ969T7 300 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 C18orf8Q96DM3 657 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 PGAP3Q96FM1 320 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-213ENST00000557262 TKTL2Q9H0I9 626 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 MUC3BQ9H195 1237 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 CHMP5Q9NZZ3 219 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 ARHGAP20Q9P2F6 1191 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 FTSJ1Q9UET6 329 aa16.32■□□□□ 0.2
TUBB3-213ENST00000557262 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 C1QTNF3-AMACRE9PGA6 284 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms